VEPD_DROME
ID VEPD_DROME Reviewed; 81 AA.
AC Q9N2P6;
DT 23-NOV-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Ventrally expressed gene D protein;
GN Name=VepD {ECO:0000312|FlyBase:FBgn0053200};
GN ORFNames=CG33200 {ECO:0000312|FlyBase:FBgn0053200};
OS Drosophila melanogaster (Fruit fly).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC Drosophilidae; Drosophila; Sophophora.
OX NCBI_TaxID=7227;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Leptin M.;
RL Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Berkeley;
RX PubMed=10731132; DOI=10.1126/science.287.5461.2185;
RA Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
RA Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
RA George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
RA Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X., Brandon R.C.,
RA Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C.,
RA Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A.,
RA An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A.,
RA Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V.,
RA Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J.,
RA Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E.,
RA Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B.,
RA Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I.,
RA Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C.,
RA Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S.,
RA Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M.,
RA Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
RA Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D.,
RA Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F.,
RA Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D.,
RA Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A.,
RA Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C.,
RA McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C.,
RA Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L.,
RA Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R.,
RA Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V.,
RA Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F.,
RA Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J.,
RA Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R.,
RA Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y.,
RA Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T.,
RA Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S.,
RA Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W.,
RA Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M.,
RA Venter J.C.;
RT "The genome sequence of Drosophila melanogaster.";
RL Science 287:2185-2195(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=Berkeley;
RX PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
RA Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
RA Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
RA Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P.,
RA Bettencourt B.R., Celniker S.E., de Grey A.D.N.J., Drysdale R.A.,
RA Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M.,
RA Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.;
RT "Annotation of the Drosophila melanogaster euchromatic genome: a systematic
RT review.";
RL Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 1-14, FUNCTION, AND TISSUE SPECIFICITY.
RC TISSUE=Embryo;
RX PubMed=8816799; DOI=10.1073/pnas.93.19.10327;
RA Casal J., Leptin M.;
RT "Identification of novel genes in Drosophila reveals the complex regulation
RT of early gene activity in the mesoderm.";
RL Proc. Natl. Acad. Sci. U.S.A. 93:10327-10332(1996).
CC -!- TISSUE SPECIFICITY: Expressed in ventral cells of the blastoderm and/or
CC in cells of ventral origin. The sharp lateral boundaries overlap with
CC snail (sna) expression. {ECO:0000269|PubMed:8816799}.
CC -!- DEVELOPMENTAL STAGE: Not expressed after germ-band retraction.
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DR EMBL; AJ276848; CAB82529.1; -; mRNA.
DR EMBL; AE013599; AAO41342.1; -; Genomic_DNA.
DR EMBL; W91834; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; NP_001246459.1; NM_001259530.2.
DR RefSeq; NP_001286720.1; NM_001299791.1.
DR RefSeq; NP_788425.1; NM_176245.4.
DR AlphaFoldDB; Q9N2P6; -.
DR IntAct; Q9N2P6; 1.
DR STRING; 7227.FBpp0298042; -.
DR PaxDb; Q9N2P6; -.
DR EnsemblMetazoa; FBtr0071826; FBpp0071737; FBgn0053200.
DR EnsemblMetazoa; FBtr0307213; FBpp0298042; FBgn0053200.
DR EnsemblMetazoa; FBtr0339534; FBpp0308617; FBgn0053200.
DR GeneID; 117331; -.
DR KEGG; dme:Dmel_CG33200; -.
DR UCSC; CG33200-RA; d. melanogaster.
DR CTD; 117331; -.
DR FlyBase; FBgn0053200; VepD.
DR VEuPathDB; VectorBase:FBgn0053200; -.
DR eggNOG; ENOG502TCII; Eukaryota.
DR HOGENOM; CLU_2560706_0_0_1; -.
DR InParanoid; Q9N2P6; -.
DR OMA; RCGQPQT; -.
DR OrthoDB; 1608932at2759; -.
DR PhylomeDB; Q9N2P6; -.
DR BioGRID-ORCS; 117331; 0 hits in 1 CRISPR screen.
DR GenomeRNAi; 117331; -.
DR PRO; PR:Q9N2P6; -.
DR Proteomes; UP000000803; Chromosome 2R.
DR Bgee; FBgn0053200; Expressed in brain and 8 other tissues.
DR ExpressionAtlas; Q9N2P6; baseline and differential.
DR Genevisible; Q9N2P6; DM.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..81
FT /note="Ventrally expressed gene D protein"
FT /id="PRO_0000065779"
SQ SEQUENCE 81 AA; 9605 MW; 926B1AECA5514D79 CRC64;
MIPHSENPFS IEDTYVEEPQ FSEQCGNSRC GQPQTAYEVY QRILLRLQAQ EHTRSTEANE
YEIRKKFWIA SFTGRPLQYQ C