VIM4_XENLA
ID VIM4_XENLA Reviewed; 463 AA.
AC P24790;
DT 01-MAR-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-1992, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=Vimentin-4;
GN Name=vim4;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=2806127; DOI=10.1242/dev.105.2.279;
RA Herrmann H., Fouquet B., Franke W.W.;
RT "Expression of intermediate filament proteins during development of Xenopus
RT laevis. I. cDNA clones encoding different forms of vimentin.";
RL Development 105:279-298(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 331-404.
RX PubMed=3224553; DOI=10.1242/dev.103.2.269;
RA Sharpe C.R.;
RT "Developmental expression of a neurofilament-M and two vimentin-like genes
RT in Xenopus laevis.";
RL Development 103:269-277(1988).
CC -!- FUNCTION: Vimentins are class-III intermediate filaments found in
CC various non-epithelial cells, especially mesenchymal cells. Vimentin is
CC attached to the nucleus, endoplasmic reticulum, and mitochondria,
CC either laterally or terminally.
CC -!- SUBUNIT: Homomer.
CC -!- PTM: One of the most prominent phosphoproteins in various cells of
CC mesenchymal origin. Phosphorylation is enhanced during cell division,
CC at which time vimentin filaments are significantly reorganized.
CC -!- SIMILARITY: Belongs to the intermediate filament family.
CC {ECO:0000255|PROSITE-ProRule:PRU01188}.
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DR EMBL; X16844; CAA34742.1; -; mRNA.
DR PIR; B43549; B43549.
DR AlphaFoldDB; P24790; -.
DR SMR; P24790; -.
DR MaxQB; P24790; -.
DR PRIDE; P24790; -.
DR OMA; EGHNADY; -.
DR Proteomes; UP000186698; Genome assembly.
DR GO; GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
DR InterPro; IPR018039; IF_conserved.
DR InterPro; IPR039008; IF_rod_dom.
DR InterPro; IPR006821; Intermed_filament_DNA-bd.
DR InterPro; IPR027699; Vimentin.
DR PANTHER; PTHR45652:SF5; PTHR45652:SF5; 1.
DR Pfam; PF00038; Filament; 1.
DR Pfam; PF04732; Filament_head; 1.
DR SMART; SM01391; Filament; 1.
DR PROSITE; PS00226; IF_ROD_1; 1.
DR PROSITE; PS51842; IF_ROD_2; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Intermediate filament; Reference proteome.
FT CHAIN 1..463
FT /note="Vimentin-4"
FT /id="PRO_0000063763"
FT DOMAIN 97..405
FT /note="IF rod"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01188"
FT REGION 1..89
FT /note="Head"
FT REGION 1..47
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 90..125
FT /note="Coil 1A"
FT REGION 126..147
FT /note="Linker 1"
FT REGION 148..239
FT /note="Coil 1B"
FT REGION 240..262
FT /note="Linker 12"
FT REGION 263..401
FT /note="Coil 2"
FT REGION 402..463
FT /note="Tail"
FT SITE 345
FT /note="Stutter"
FT /evidence="ECO:0000255"
SQ SEQUENCE 463 AA; 53497 MW; 15A1CD9547C99AFA CRC64;
MATTKSSYRR IFGGNPRSSS SGSRYVTSSS RYSLGSSMRP GTSSSRMVYS TSASPAVFKS
SSVRLRSSLP PARMADSVDF TLADAVNLEF KANRTNEKAE MIELNDRFAN FIDKVRFLEQ
QNKILVAELE QLKGKGTSRI GDLYEEEMRE IRRQLDQAIN EKARVEVDRD NLGDDLQRLR
EKLQDEMIQR EEAEGNLQSF RQDVDNASLA RIDLERKVES LQEEIVFLKK LHDEEIRELQ
LQIQESHIQV DMDVSKPDLT AALRDVRQQY ENVASKNLAD AEDWYKSKFA DLSEAANRNN
EALRQAKQDT NDYRRQIQTL TCEIDAMKGS NESYERQMRE MEENFALEAA NYQDTIQRLQ
EEIQNMKEEM SRHLREYQDL LNVKMALDIE IATYRKLLEG EESRITIPVH SFSTMSLRET
NLDSHPVDTH SKRTLLIKTV ETRDGQVINE SSQHHDDLDL DLE