VINT_BPP22
ID VINT_BPP22 Reviewed; 387 AA.
AC P04890; Q7PCH4;
DT 13-AUG-1987, integrated into UniProtKB/Swiss-Prot.
DT 13-AUG-1987, sequence version 1.
DT 23-FEB-2022, entry version 101.
DE RecName: Full=Integrase;
DE EC=2.7.7.- {ECO:0000250|UniProtKB:P03700};
DE EC=3.1.-.- {ECO:0000250|UniProtKB:P03700};
GN Name=int;
OS Salmonella phage P22 (Bacteriophage P22).
OC Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes;
OC Caudovirales; Podoviridae; Lederbergvirus.
OX NCBI_TaxID=10754;
OH NCBI_TaxID=90371; Salmonella typhimurium.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=3491212; DOI=10.1016/0022-2836(86)90491-2;
RA Leong J.M., Nunes-Dueby S.E., Oser A.B., Lesser C.F., Youderian P.,
RA Susskind M.M., Landy A.;
RT "Structural and regulatory divergence among site-specific recombination
RT genes of lambdoid phage.";
RL J. Mol. Biol. 189:603-616(1986).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=11053393; DOI=10.1128/jb.182.22.6472-6481.2000;
RA Vander Byl C.S., Kropinski A.M.B.;
RT "Sequence of the genome of Salmonella bacteriophage P22.";
RL J. Bacteriol. 182:6472-6481(2000).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=12562822; DOI=10.1128/jb.185.4.1475-1477.2003;
RA Pedulla M.L., Ford M.E., Karthikeyan T., Houtz J.M., Hendrix R.W.,
RA Hatfull G.F., Poteete A.R., Gilcrease E.B., Winn-Stapley D.A.,
RA Casjens S.R.;
RT "Corrected sequence of the bacteriophage P22 genome.";
RL J. Bacteriol. 185:1475-1477(2003).
CC -!- FUNCTION: Integrase is necessary for integration of the phage into the
CC host genome by site-specific recombination. In conjunction with
CC excisionase, integrase is also necessary for excision of the prophage
CC from the host genome.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family. {ECO:0000305}.
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DR EMBL; X04052; CAA27685.1; -; Genomic_DNA.
DR EMBL; AF217253; AAF75002.1; -; Genomic_DNA.
DR EMBL; BK000583; DAA00998.1; -; Genomic_DNA.
DR PIR; C24253; RSBPIP.
DR RefSeq; NP_059584.1; NC_002371.2.
DR SMR; P04890; -.
DR PRIDE; P04890; -.
DR GeneID; 1262851; -.
DR KEGG; vg:1262851; -.
DR Proteomes; UP000001795; Genome.
DR Proteomes; UP000007960; Genome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0075713; P:establishment of integrated proviral latency; IEA:UniProtKB-KW.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0044826; P:viral genome integration into host DNA; IEA:UniProtKB-KW.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; -; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; SSF56349; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA integration; DNA recombination; DNA-binding; Hydrolase;
KW Reference proteome; Transferase; Viral genome integration;
KW Virus entry into host cell.
FT CHAIN 1..387
FT /note="Integrase"
FT /id="PRO_0000197521"
FT DOMAIN 57..161
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01248"
FT DOMAIN 181..362
FT /note="Tyr recombinase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 215
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 242
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 314
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 317
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 340
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 349
FT /note="O-(3'-phospho-DNA)-tyrosine intermediate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
SQ SEQUENCE 387 AA; 44783 MW; 5E4EBA51B3B30802 CRC64;
MSLFRRGETW YASFTLPNGK RFKQSLGTKD KRQATELHDK LKAEAWRVSK LGETPDMTFE
GACVRWLEEK AHKKSLDDDK SRIGFWLQHF AGMQLKDITE TKIYSAIQKI TNRRHEENWK
LMDEACRKNG KQPPVFKPKP AAVATKATHL SFIKALLRAA EREWKMLDKA PIIKVPQPKN
KRIRWLEPHE AKRLIDECQE PLKSVVEFAL STGLRRSNII NLEWQQIDMQ RKVAWIHPEQ
SKSNHAIGVA LNDTACRVLK KQIGNHHKWV FVYKESSTKP DGTKSPVVRK MRYDANTAWR
AALKRAGIED FRFHDLRHTW ASWLVQAGVP ISVLQEMGGW ESIEMVRRYA HLAPNHLTEH
ARQIDSIFGT SVPNMSHSKN KEGTNNT