VINT_BPP4
ID VINT_BPP4 Reviewed; 439 AA.
AC P08320;
DT 01-AUG-1988, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1996, sequence version 2.
DT 02-DEC-2020, entry version 104.
DE RecName: Full=Integrase;
DE EC=2.7.7.- {ECO:0000250|UniProtKB:P36932};
DE EC=3.1.-.- {ECO:0000250|UniProtKB:P36932};
GN Name=int;
OS Enterobacteria phage P4 (Bacteriophage P4).
OC Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes;
OC Caudovirales.
OX NCBI_TaxID=10680;
OH NCBI_TaxID=562; Escherichia coli.
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=2183201; DOI=10.1093/nar/18.6.1649;
RA Halling C., Calendar R., Christie G.E., Dale E.C., Deho G., Finkel S.,
RA Flensburg J., Ghisotti D., Kahn M.L., Lane K.B., Lin C.-S., Lindqvist B.H.,
RA Pierson L.S., Six E.W., Sunshine M.G., Ziermann R.;
RT "DNA sequence of satellite bacteriophage P4.";
RL Nucleic Acids Res. 18:1649-1649(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=3119856; DOI=10.1016/0022-2836(87)90026-x;
RA Pierson L.S., Kahn M.L.;
RT "Integration of satellite bacteriophage P4 in Escherichia coli. DNA
RT sequences of the phage and host regions involved in site-specific
RT recombination.";
RL J. Mol. Biol. 196:487-496(1987).
RN [3]
RP SEQUENCE REVISION.
RA Halling C.H.;
RL Submitted (JAN-1994) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 430-439.
RX PubMed=2403440; DOI=10.1128/jvi.64.1.24-36.1990;
RA Ghisotti D., Finkel S., Halling C., Deho G., Sironi G., Calendar R.;
RT "Nonessential region of bacteriophage P4: DNA sequence, transcription, gene
RT products, and functions.";
RL J. Virol. 64:24-36(1990).
CC -!- FUNCTION: Integrase is necessary for integration of the phage into the
CC host genome by site-specific recombination.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family. {ECO:0000305}.
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DR EMBL; X51522; CAA35897.1; -; Genomic_DNA.
DR EMBL; X05947; CAA29379.1; ALT_SEQ; Genomic_DNA.
DR EMBL; M27748; AAA32430.1; -; Genomic_DNA.
DR PIR; JW0023; RSBPP4.
DR RefSeq; NP_042035.1; NC_001609.1.
DR SMR; P08320; -.
DR GeneID; 1261092; -.
DR KEGG; vg:1261092; -.
DR Proteomes; UP000009093; Genome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0039695; P:DNA-templated viral transcription; IMP:CACAO.
DR GO; GO:0075713; P:establishment of integrated proviral latency; IEA:UniProtKB-KW.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0044826; P:viral genome integration into host DNA; IEA:UniProtKB-KW.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; -; 1.
DR Gene3D; 3.30.160.390; -; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR038488; Integrase_DNA-bd_sf.
DR InterPro; IPR025166; Integrase_DNA_bind_dom.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR Pfam; PF13356; Arm-DNA-bind_3; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; SSF56349; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA integration; DNA recombination; DNA-binding; Hydrolase;
KW Reference proteome; Transferase; Viral genome integration;
KW Virus entry into host cell.
FT CHAIN 1..439
FT /note="Integrase"
FT /id="PRO_0000197507"
FT DOMAIN 102..182
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01248"
FT DOMAIN 205..398
FT /note="Tyr recombinase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 244
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 273
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 347
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 350
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 374
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 384
FT /note="O-(3'-phospho-DNA)-tyrosine intermediate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
SQ SEQUENCE 439 AA; 50839 MW; EEB7023721395BFF CRC64;
MCPQMKLNAR QVETAKPKDK TYKMADGGGL YLEVSAKGSK YWRMKYRRPS DKKEDRLAFG
VWPTVTLAQA RAKRDEAKKL LVQGIDPKVV QKEARAENSG AYTFEAIARE WHASNKRWSE
DHRSRVLRYL ELYIFPHIGS SDIRQLKTSH LLAPIKKVDA SGKHDVAQRL QQRVTAIMRY
AVQNDYIDSN PASDMAGALS TTKARHYPAL PSSRFPEFLA RLAAYRGRVM TRIAVKLSLL
TFVRSSELRF ARWDEFDFDK SLWRIPAKRE EIKGVRYSYR GMKMKEEHIV PLSRQAMILL
NQLKQISGDK ELLFPGDHDA TKVMSENTVN SALRAMGYDT KTEVCGHGFR TMARGALGES
GLWSDDAIER QLSHSERNNV RAAYIHTSEH LDERRLMMQW WADYLDMNRN KYISLMIIQN
TKKYLNKNSY WLIFKMSVK