VIOA_ECOLX
ID VIOA_ECOLX Reviewed; 371 AA.
AC Q9XCW4;
DT 16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1999, sequence version 1.
DT 03-AUG-2022, entry version 64.
DE RecName: Full=dTDP-4-amino-4,6-dideoxy-D-glucose transaminase;
DE EC=2.6.1.33;
GN Name=vioA;
OS Escherichia coli.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=562;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND GENE NAME.
RC STRAIN=O7:K1 / VW187;
RX PubMed=10517601; DOI=10.1099/00221287-145-9-2485;
RA Marolda C.L., Feldman M.F., Valvano M.A.;
RT "Genetic organization of the O7-specific lipopolysaccharide biosynthesis
RT cluster of Escherichia coli VW187 (O7:K1).";
RL Microbiology 145:2485-2495(1999).
RN [2]
RP FUNCTION, CATALYTIC ACTIVITY, COFACTOR, BIOPHYSICOCHEMICAL PROPERTIES, AND
RP PATHWAY.
RC STRAIN=O7 / G1112;
RX PubMed=17905981; DOI=10.1128/jb.00777-07;
RA Wang Y., Xu Y., Perepelov A.V., Qi Y., Knirel Y.A., Wang L., Feng L.;
RT "Biochemical characterization of dTDP-D-Qui4N and dTDP-D-Qui4NAc
RT biosynthetic pathways in Shigella dysenteriae type 7 and Escherichia coli
RT O7.";
RL J. Bacteriol. 189:8626-8635(2007).
CC -!- FUNCTION: Catalyzes the conversion of dTDP-4-dehydro-6-deoxy-D-glucose
CC (dTDP-D-Glc4O) to dTDP-4-amino-4,6-dideoxy-D-glucose (dTDP-D-Qui4N).
CC {ECO:0000269|PubMed:17905981}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2-oxoglutarate + dTDP-4-amino-4,6-dideoxy-D-glucose = dTDP-4-
CC dehydro-6-deoxy-alpha-D-glucose + L-glutamate; Xref=Rhea:RHEA:19085,
CC ChEBI:CHEBI:16810, ChEBI:CHEBI:29985, ChEBI:CHEBI:57582,
CC ChEBI:CHEBI:57649; EC=2.6.1.33;
CC Evidence={ECO:0000269|PubMed:17905981};
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000269|PubMed:17905981};
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=45.8 uM for dTDP-D-Glc4O {ECO:0000269|PubMed:17905981};
CC -!- PATHWAY: Bacterial outer membrane biogenesis; lipopolysaccharide
CC biosynthesis. {ECO:0000269|PubMed:17905981}.
CC -!- SIMILARITY: Belongs to the DegT/DnrJ/EryC1 family. {ECO:0000305}.
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DR EMBL; AF125322; AAD44154.1; -; Genomic_DNA.
DR AlphaFoldDB; Q9XCW4; -.
DR SMR; Q9XCW4; -.
DR KEGG; ag:AAD44154; -.
DR BioCyc; MetaCyc:MON-18136; -.
DR SABIO-RK; Q9XCW4; -.
DR UniPathway; UPA00030; -.
DR GO; GO:0019179; F:dTDP-4-amino-4,6-dideoxy-D-glucose transaminase activity; IEA:UniProtKB-EC.
DR GO; GO:0009103; P:lipopolysaccharide biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd00616; AHBA_syn; 1.
DR Gene3D; 3.40.640.10; -; 1.
DR InterPro; IPR000653; DegT/StrS_aminotransferase.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR PANTHER; PTHR30244; PTHR30244; 1.
DR Pfam; PF01041; DegT_DnrJ_EryC1; 1.
DR PIRSF; PIRSF000390; PLP_StrS; 1.
DR SUPFAM; SSF53383; SSF53383; 1.
PE 1: Evidence at protein level;
KW Aminotransferase; Lipopolysaccharide biosynthesis; Pyridoxal phosphate;
KW Transferase.
FT CHAIN 1..371
FT /note="dTDP-4-amino-4,6-dideoxy-D-glucose transaminase"
FT /id="PRO_0000424154"
FT MOD_RES 186
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000250"
SQ SEQUENCE 371 AA; 41665 MW; 44AA8360C6C630D1 CRC64;
MNDKTIPVTQ PSLPELAEFM PYLEKIWKNK WLTNNGPFHQ ELEEKLCEFL GVQHISLFNN
ATIALITALQ ALRITGEVIT TPYSFVATSH AILWNGLTPV FVDIENDGYN IDYRKIEQAI
TPKTSAILPV HCYSTPCEVE EIQKIADNYG LKVIYDAAHA FGVNFKGGKV YLTMVIYQFL
VSMRRKSSIN FEGGAIISPD AKTKLRIDRL KNFGIADELT VTAPGINGKM SEINAAFGLV
QLKHIEGSIS KRKIIDSLYR NLLKGTPGIT IFPGNINTNS NYSYFPILID DGFHMSRDQA
YELLKKNNIL SRKYFYPLIS NMPMYRGLIS ASVDNLPIAN SVADKVLCLP IYTDLNEEIV
VKITKLLLGK M