VIRB1_AGRFC
ID VIRB1_AGRFC Reviewed; 245 AA.
AC P17791;
DT 01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1996, sequence version 3.
DT 25-MAY-2022, entry version 111.
DE RecName: Full=Protein virB1;
DE Flags: Precursor;
GN Name=virB1; OrderedLocusNames=Atu6167; ORFNames=AGR_pTi_3;
OS Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens
OS (strain C58)).
OG Plasmid pTiC58.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
OC Agrobacterium tumefaciens complex.
OX NCBI_TaxID=176299;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2370849; DOI=10.1007/bf00261729;
RA Kuldau G.A., de Vos G., Owen J., McCaffrey G., Zambryski P.;
RT "The virB operon of Agrobacterium tumefaciens pTiC58 encodes 11 open
RT reading frames.";
RL Mol. Gen. Genet. 221:256-266(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2194232; DOI=10.1016/0147-619x(90)90028-b;
RA Rogowsky P.M., Powell B.S., Shirasu K., Lin T.-S., Morel P., Zyprian E.M.,
RA Steck T.R., Kado C.I.;
RT "Molecular characterization of the vir regulon of Agrobacterium
RT tumefaciens: complete nucleotide sequence and gene organization of the
RT 28.63-kbp regulon cloned as a single unit.";
RL Plasmid 23:85-106(1990).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2233252; DOI=10.1111/j.1365-2958.1990.tb00690.x;
RA Shirasu K., Morel P., Kado C.I.;
RT "Characterization of the virB operon of an Agrobacterium tumefaciens Ti
RT plasmid: nucleotide sequence and protein analysis.";
RL Mol. Microbiol. 4:1153-1163(1990).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=11743193; DOI=10.1126/science.1066804;
RA Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K.,
RA Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y.,
RA Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P.,
RA Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R.,
RA Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G.,
RA Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y.,
RA Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S.,
RA Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F.,
RA Gordon M.P., Olson M.V., Nester E.W.;
RT "The genome of the natural genetic engineer Agrobacterium tumefaciens
RT C58.";
RL Science 294:2317-2323(2001).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C58 / ATCC 33970;
RX PubMed=11743194; DOI=10.1126/science.1066803;
RA Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B.,
RA Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K.,
RA Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M.,
RA Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C.,
RA Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
RT "Genome sequence of the plant pathogen and biotechnology agent
RT Agrobacterium tumefaciens C58.";
RL Science 294:2323-2328(2001).
CC -!- FUNCTION: VirB proteins are suggested to act at the bacterial surface
CC and there play an important role in directing T-DNA transfer to plant
CC cells.
CC -!- SIMILARITY: Belongs to the virb1 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA37354.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; X53264; CAA37354.1; ALT_INIT; Genomic_DNA.
DR EMBL; J03320; AAA91591.1; -; Genomic_DNA.
DR EMBL; AE007871; AAK90928.2; -; Genomic_DNA.
DR PIR; AE3248; AE3248.
DR PIR; S12341; B1AG58.
DR RefSeq; NP_396487.2; NC_003065.3.
DR RefSeq; WP_010974915.1; NC_003065.3.
DR AlphaFoldDB; P17791; -.
DR IntAct; P17791; 2.
DR CAZy; GH23; Glycoside Hydrolase Family 23.
DR EnsemblBacteria; AAK90928; AAK90928; Atu6167.
DR KEGG; atu:Atu6167; -.
DR HOGENOM; CLU_076837_1_0_5; -.
DR OMA; FARECAP; -.
DR Proteomes; UP000000813; Plasmid Ti.
DR GO; GO:0043684; C:type IV secretion system complex; IGC:PAMGO_GAT.
DR GO; GO:0030255; P:protein secretion by the type IV secretion system; IGC:PAMGO_GAT.
DR InterPro; IPR023346; Lysozyme-like_dom_sf.
DR InterPro; IPR008258; Transglycosylase_SLT_dom_1.
DR Pfam; PF01464; SLT; 1.
DR SUPFAM; SSF53955; SSF53955; 1.
PE 3: Inferred from homology;
KW Crown gall tumor; Plasmid; Reference proteome; Signal.
FT SIGNAL 1..28
FT /evidence="ECO:0000255"
FT CHAIN 29..245
FT /note="Protein virB1"
FT /id="PRO_0000022657"
FT REGION 176..245
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 182..202
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 18
FT /note="P -> T (in Ref. 2 and 3)"
FT /evidence="ECO:0000305"
FT CONFLICT 85
FT /note="R -> G (in Ref. 2 and 3)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 245 AA; 26134 MW; 2755411BF779056C CRC64;
MLKATGPLSI ILLASTCPSS GAAPLSFAEF NNFARECAPS VAPSTLAAIA QVESRFDPLA
VHDNTTGETL HWQNQAQATQ VVMDRLEARH SLDVGLMQIN SRNFSVLGLT PDGALQPCTS
LSVAANLLGS RYAGGNTADD EQLSLRRAIS AYNTGDFTHG FANGYVRKVE TAAQQLVPPL
TARPKDDREK PGSEETWDVW GAYKRRSPEG GAGGSSGPPP PPDEDNRKSE DDDQLLFDLN
QGGPQ