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VIRB1_AGRFC
ID   VIRB1_AGRFC             Reviewed;         245 AA.
AC   P17791;
DT   01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT   01-FEB-1996, sequence version 3.
DT   25-MAY-2022, entry version 111.
DE   RecName: Full=Protein virB1;
DE   Flags: Precursor;
GN   Name=virB1; OrderedLocusNames=Atu6167; ORFNames=AGR_pTi_3;
OS   Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens
OS   (strain C58)).
OG   Plasmid pTiC58.
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC   Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
OC   Agrobacterium tumefaciens complex.
OX   NCBI_TaxID=176299;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=2370849; DOI=10.1007/bf00261729;
RA   Kuldau G.A., de Vos G., Owen J., McCaffrey G., Zambryski P.;
RT   "The virB operon of Agrobacterium tumefaciens pTiC58 encodes 11 open
RT   reading frames.";
RL   Mol. Gen. Genet. 221:256-266(1990).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=2194232; DOI=10.1016/0147-619x(90)90028-b;
RA   Rogowsky P.M., Powell B.S., Shirasu K., Lin T.-S., Morel P., Zyprian E.M.,
RA   Steck T.R., Kado C.I.;
RT   "Molecular characterization of the vir regulon of Agrobacterium
RT   tumefaciens: complete nucleotide sequence and gene organization of the
RT   28.63-kbp regulon cloned as a single unit.";
RL   Plasmid 23:85-106(1990).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX   PubMed=2233252; DOI=10.1111/j.1365-2958.1990.tb00690.x;
RA   Shirasu K., Morel P., Kado C.I.;
RT   "Characterization of the virB operon of an Agrobacterium tumefaciens Ti
RT   plasmid: nucleotide sequence and protein analysis.";
RL   Mol. Microbiol. 4:1153-1163(1990).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=11743193; DOI=10.1126/science.1066804;
RA   Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K.,
RA   Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y.,
RA   Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P.,
RA   Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R.,
RA   Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G.,
RA   Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y.,
RA   Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S.,
RA   Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F.,
RA   Gordon M.P., Olson M.V., Nester E.W.;
RT   "The genome of the natural genetic engineer Agrobacterium tumefaciens
RT   C58.";
RL   Science 294:2317-2323(2001).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=C58 / ATCC 33970;
RX   PubMed=11743194; DOI=10.1126/science.1066803;
RA   Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B.,
RA   Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K.,
RA   Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M.,
RA   Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C.,
RA   Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
RT   "Genome sequence of the plant pathogen and biotechnology agent
RT   Agrobacterium tumefaciens C58.";
RL   Science 294:2323-2328(2001).
CC   -!- FUNCTION: VirB proteins are suggested to act at the bacterial surface
CC       and there play an important role in directing T-DNA transfer to plant
CC       cells.
CC   -!- SIMILARITY: Belongs to the virb1 family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=CAA37354.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; X53264; CAA37354.1; ALT_INIT; Genomic_DNA.
DR   EMBL; J03320; AAA91591.1; -; Genomic_DNA.
DR   EMBL; AE007871; AAK90928.2; -; Genomic_DNA.
DR   PIR; AE3248; AE3248.
DR   PIR; S12341; B1AG58.
DR   RefSeq; NP_396487.2; NC_003065.3.
DR   RefSeq; WP_010974915.1; NC_003065.3.
DR   AlphaFoldDB; P17791; -.
DR   IntAct; P17791; 2.
DR   CAZy; GH23; Glycoside Hydrolase Family 23.
DR   EnsemblBacteria; AAK90928; AAK90928; Atu6167.
DR   KEGG; atu:Atu6167; -.
DR   HOGENOM; CLU_076837_1_0_5; -.
DR   OMA; FARECAP; -.
DR   Proteomes; UP000000813; Plasmid Ti.
DR   GO; GO:0043684; C:type IV secretion system complex; IGC:PAMGO_GAT.
DR   GO; GO:0030255; P:protein secretion by the type IV secretion system; IGC:PAMGO_GAT.
DR   InterPro; IPR023346; Lysozyme-like_dom_sf.
DR   InterPro; IPR008258; Transglycosylase_SLT_dom_1.
DR   Pfam; PF01464; SLT; 1.
DR   SUPFAM; SSF53955; SSF53955; 1.
PE   3: Inferred from homology;
KW   Crown gall tumor; Plasmid; Reference proteome; Signal.
FT   SIGNAL          1..28
FT                   /evidence="ECO:0000255"
FT   CHAIN           29..245
FT                   /note="Protein virB1"
FT                   /id="PRO_0000022657"
FT   REGION          176..245
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        182..202
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   CONFLICT        18
FT                   /note="P -> T (in Ref. 2 and 3)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        85
FT                   /note="R -> G (in Ref. 2 and 3)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   245 AA;  26134 MW;  2755411BF779056C CRC64;
     MLKATGPLSI ILLASTCPSS GAAPLSFAEF NNFARECAPS VAPSTLAAIA QVESRFDPLA
     VHDNTTGETL HWQNQAQATQ VVMDRLEARH SLDVGLMQIN SRNFSVLGLT PDGALQPCTS
     LSVAANLLGS RYAGGNTADD EQLSLRRAIS AYNTGDFTHG FANGYVRKVE TAAQQLVPPL
     TARPKDDREK PGSEETWDVW GAYKRRSPEG GAGGSSGPPP PPDEDNRKSE DDDQLLFDLN
     QGGPQ
 
 
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