VIRB5_AGRFC
ID VIRB5_AGRFC Reviewed; 220 AA.
AC P17795;
DT 01-AUG-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1990, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Protein virB5;
DE Flags: Precursor;
GN Name=virB5; OrderedLocusNames=Atu6171; ORFNames=AGR_pTi_9;
OS Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens
OS (strain C58)).
OG Plasmid pTiC58.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
OC Agrobacterium tumefaciens complex.
OX NCBI_TaxID=176299;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2370849; DOI=10.1007/bf00261729;
RA Kuldau G.A., de Vos G., Owen J., McCaffrey G., Zambryski P.;
RT "The virB operon of Agrobacterium tumefaciens pTiC58 encodes 11 open
RT reading frames.";
RL Mol. Gen. Genet. 221:256-266(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2194232; DOI=10.1016/0147-619x(90)90028-b;
RA Rogowsky P.M., Powell B.S., Shirasu K., Lin T.-S., Morel P., Zyprian E.M.,
RA Steck T.R., Kado C.I.;
RT "Molecular characterization of the vir regulon of Agrobacterium
RT tumefaciens: complete nucleotide sequence and gene organization of the
RT 28.63-kbp regulon cloned as a single unit.";
RL Plasmid 23:85-106(1990).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2233252; DOI=10.1111/j.1365-2958.1990.tb00690.x;
RA Shirasu K., Morel P., Kado C.I.;
RT "Characterization of the virB operon of an Agrobacterium tumefaciens Ti
RT plasmid: nucleotide sequence and protein analysis.";
RL Mol. Microbiol. 4:1153-1163(1990).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=11743193; DOI=10.1126/science.1066804;
RA Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K.,
RA Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y.,
RA Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P.,
RA Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R.,
RA Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G.,
RA Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y.,
RA Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S.,
RA Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F.,
RA Gordon M.P., Olson M.V., Nester E.W.;
RT "The genome of the natural genetic engineer Agrobacterium tumefaciens
RT C58.";
RL Science 294:2317-2323(2001).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C58 / ATCC 33970;
RX PubMed=11743194; DOI=10.1126/science.1066803;
RA Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B.,
RA Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K.,
RA Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M.,
RA Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C.,
RA Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
RT "Genome sequence of the plant pathogen and biotechnology agent
RT Agrobacterium tumefaciens C58.";
RL Science 294:2323-2328(2001).
CC -!- FUNCTION: VirB proteins are suggested to act at the bacterial surface
CC and there play an important role in directing T-DNA transfer to plant
CC cells.
CC -!- INTERACTION:
CC P17795; P58758: tzs; NbExp=4; IntAct=EBI-6400510, EBI-6402098;
CC -!- SIMILARITY: Belongs to the virb5 family. {ECO:0000305}.
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DR EMBL; X53264; CAA37358.1; -; Genomic_DNA.
DR EMBL; J03320; AAA91595.1; -; Genomic_DNA.
DR EMBL; AE007871; AAK90933.1; -; Genomic_DNA.
DR PIR; AI3248; AI3248.
DR PIR; S12345; B5AG58.
DR RefSeq; NP_396492.1; NC_003065.3.
DR RefSeq; WP_010891499.1; NC_003065.3.
DR AlphaFoldDB; P17795; -.
DR SMR; P17795; -.
DR IntAct; P17795; 3.
DR EnsemblBacteria; AAK90933; AAK90933; Atu6171.
DR GeneID; 39477130; -.
DR KEGG; atu:Atu6171; -.
DR PATRIC; fig|176299.10.peg.5367; -.
DR HOGENOM; CLU_1255117_0_0_5; -.
DR OMA; RSRNIMQ; -.
DR BioCyc; AGRO:ATU6171-MON; -.
DR Proteomes; UP000000813; Plasmid Ti.
DR GO; GO:0043684; C:type IV secretion system complex; IGC:PAMGO_GAT.
DR GO; GO:0030255; P:protein secretion by the type IV secretion system; IGC:PAMGO_GAT.
PE 1: Evidence at protein level;
KW Crown gall tumor; Plasmid; Reference proteome; Signal.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..220
FT /note="Protein virB5"
FT /id="PRO_0000022666"
SQ SEQUENCE 220 AA; 23269 MW; 78FFF913E03EA207 CRC64;
MKIMQLVAAA MAVSLLSVGP ARAQFVVSDP ATEAETLATA LETAANLEQT ITMVAMLTSA
YGVTGLLTSL NQKNQYPSTR DLDTEMFSPR MPMSTTARAI TTDTDRAVVG GDAEADLLRS
QITGSANSAG IAADNLETMD KRLTANAETS TQLSRSRNIM QATVTNGLLL KQIHDAMIQN
VQATSLLTMT TAQAGLHEAE EAAAQRKEHQ KTAVIFGAVP