VIRC1_AGRFC
ID VIRC1_AGRFC Reviewed; 231 AA.
AC P07165;
DT 01-APR-1988, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1988, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=Protein virC1;
GN Name=virC1; OrderedLocusNames=Atu6180; ORFNames=AGR_pTi_18;
OS Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens
OS (strain C58)).
OG Plasmid pTiC58.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
OC Agrobacterium tumefaciens complex.
OX NCBI_TaxID=176299;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=3584058; DOI=10.1128/jb.169.6.2336-2344.1987;
RA Close T.J., Tait R.C., Rempel H.C., Hirooka T., Kim L., Kado C.I.;
RT "Molecular characterization of the virC genes of the Ti plasmid.";
RL J. Bacteriol. 169:2336-2344(1987).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2194232; DOI=10.1016/0147-619x(90)90028-b;
RA Rogowsky P.M., Powell B.S., Shirasu K., Lin T.-S., Morel P., Zyprian E.M.,
RA Steck T.R., Kado C.I.;
RT "Molecular characterization of the vir regulon of Agrobacterium
RT tumefaciens: complete nucleotide sequence and gene organization of the
RT 28.63-kbp regulon cloned as a single unit.";
RL Plasmid 23:85-106(1990).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=11743193; DOI=10.1126/science.1066804;
RA Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K.,
RA Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y.,
RA Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P.,
RA Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R.,
RA Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G.,
RA Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y.,
RA Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S.,
RA Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F.,
RA Gordon M.P., Olson M.V., Nester E.W.;
RT "The genome of the natural genetic engineer Agrobacterium tumefaciens
RT C58.";
RL Science 294:2317-2323(2001).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C58 / ATCC 33970;
RX PubMed=11743194; DOI=10.1126/science.1066803;
RA Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B.,
RA Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K.,
RA Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M.,
RA Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C.,
RA Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
RT "Genome sequence of the plant pathogen and biotechnology agent
RT Agrobacterium tumefaciens C58.";
RL Science 294:2323-2328(2001).
CC -!- INTERACTION:
CC P07165; P07166: virC2; NbExp=3; IntAct=EBI-7412683, EBI-7412655;
CC P07165; P18591: virD1; NbExp=4; IntAct=EBI-7412683, EBI-7412667;
CC P07165; P18592: virD2; NbExp=4; IntAct=EBI-7412683, EBI-7412635;
CC P07165; P18594: virD4; NbExp=4; IntAct=EBI-7412683, EBI-7412695;
CC -!- MISCELLANEOUS: The Ti plasmid contains at least six transcriptional
CC units, designated vir loci, which are essential for efficient crown-
CC gall tumorigenesis.
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DR EMBL; Y00535; CAA68597.1; -; Genomic_DNA.
DR EMBL; J03320; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; M16397; AAA98386.1; -; Genomic_DNA.
DR EMBL; AE007871; AAK90942.1; -; Genomic_DNA.
DR PIR; A25975; A25975.
DR PIR; AB3250; AB3250.
DR RefSeq; NP_396501.1; NC_003065.3.
DR RefSeq; WP_010891490.1; NC_003065.3.
DR AlphaFoldDB; P07165; -.
DR SMR; P07165; -.
DR IntAct; P07165; 4.
DR MINT; P07165; -.
DR EnsemblBacteria; AAK90942; AAK90942; Atu6180.
DR GeneID; 39477121; -.
DR KEGG; atu:Atu6180; -.
DR PATRIC; fig|176299.10.peg.5374; -.
DR HOGENOM; CLU_104617_0_0_5; -.
DR OMA; MHERDAF; -.
DR PhylomeDB; P07165; -.
DR BioCyc; AGRO:ATU6180-MON; -.
DR Proteomes; UP000000813; Plasmid Ti.
DR GO; GO:0003677; F:DNA binding; IGC:PAMGO_GAT.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR009744; VirC1.
DR Pfam; PF07015; VirC1; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 1: Evidence at protein level;
KW Crown gall tumor; Plasmid; Reference proteome.
FT CHAIN 1..231
FT /note="Protein virC1"
FT /id="PRO_0000065850"
SQ SEQUENCE 231 AA; 25507 MW; 61CA5A8DE130636B CRC64;
MKLLTFCSFK GGAGKTTALM GLCAAFASDG KRLALFDADE NRPLTRWKEN ALRSNTWGSF
CEVYAAEEMA LLEAAYEDAE LQGFDYALAD THGGSSELNN TIIASSNLLL IPTMLTPLDI
DEALSTYRYV IELLLSENLA IPTAVLRQRV PVGRLTTSQR AMSDMLASLP VVQSPMHERD
AFAAMKERGM LHLTLLNMRT DPTMRLLERN LRIAMEELVT ISKLVSEALE G