ID   VIRD4_AGRRH             Reviewed;         671 AA.
AC   P13464;
DT   01-JAN-1990, integrated into UniProtKB/Swiss-Prot.
DT   01-JAN-1990, sequence version 1.
DT   03-AUG-2022, entry version 87.
DE   RecName: Full=Protein VirD4;
GN   Name=virD4;
OS   Agrobacterium rhizogenes.
OG   Plasmid pRiA4b.
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC   Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.
OX   NCBI_TaxID=359;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=A4;
RX   PubMed=3185501; DOI=10.1007/bf00339586;
RA   Hirayama T., Muranaka T., Ohkawa H., Oka A.;
RT   "Organization and characterization of the virCD genes from Agrobacterium
RT   rhizogenes.";
RL   Mol. Gen. Genet. 213:229-237(1988).
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Multi-pass membrane
CC       protein {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the VirD4/TraG family. {ECO:0000305}.
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DR   EMBL; X12867; CAA31353.1; -; Genomic_DNA.
DR   PIR; S06886; S06886.
DR   RefSeq; WP_032488284.1; NZ_VCBD01000008.1.
DR   AlphaFoldDB; P13464; -.
DR   STRING; 359.CN09_19175; -.
DR   TCDB; 3.A.7.1.1; the type iv (conjugal dna-protein transfer or virb) secretory pathway (ivsp) family.
DR   GeneID; 66389688; -.
DR   eggNOG; COG3505; Bacteria.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   Gene3D; 3.40.50.300; -; 1.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR003688; TraG/VirD4.
DR   Pfam; PF02534; T4SS-DNA_transf; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
PE   3: Inferred from homology;
KW   Cell membrane; Conjugation; Crown gall tumor; Membrane; Plasmid;
KW   Transmembrane; Transmembrane helix.
FT   CHAIN           1..671
FT                   /note="Protein VirD4"
FT                   /id="PRO_0000221651"
FT   TRANSMEM        12..32
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        60..80
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        153..173
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   671 AA;  73869 MW;  A10B4151B0FB5522 CRC64;
     MNSSKITPQR LALSIVCSLA AGFCAASLYA TFRHGFNGEA MMTFSVFAFW YETPLYIGHA
     TPVFFCGLSI IIATSVVVLL SQLIISLRNR EHHGTARWAA FGEMRHAGYL QRYNRIKGPV
     FGKTCGPLWF GNYLTNGEQP HSLVVAPTRA GKGVGVVIPT LLTFKGTVIA LDVKGELFEL
     TSRARKSSGD AVFKFSPLDP ERRTHCYNPV LDIAALPPER QFTETRRLAA NLITAKGKGA
     EGFIDGARDL FVAGILTCIE RGTPTIGAVY DLFAQPGEKY KLFAHLAEES RNKEAQRIFD
     NMAGNDTKIL TSYTSVLGDG GLNLWADPLV KAATSRSDFS VYDLRRKRTC VYLCVSPNDL
     EVVAPLMRLL FQQVVSILQR SLPGKDERYE VLFLLDEFKH LGKLEAIETA ITTIAGYKGR
     FMFIIQSLSA LSGTYDEAGK QNFLSNTGVQ VFMATADDET PTYISKAIGE YTFQARSTSY
     SQARMFDHNI QISDQGAPLL RPEQVRLLDD KSEIVLIKGQ PPLKLRKVRY YSDRMLRRLF
     ECQIGALPEP ASLMLAQDVH QDGQDHLSQQ AAVTAALGLG DIDSLVNNGE TPTQQNSDMN
     DEQDNLAIGI YAPQVSVEID DVVEDANARG VAPVSSVPAE MAPALSAQQQ LLGQIIALQQ
     RYRPVSSNPI E