VL1_COPV6
ID VL1_COPV6 Reviewed; 503 AA.
AC Q89828;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 23-FEB-2022, entry version 91.
DE RecName: Full=Major capsid protein L1 {ECO:0000255|HAMAP-Rule:MF_04002};
GN Name=L1 {ECO:0000255|HAMAP-Rule:MF_04002};
OS Canine oral papillomavirus (strain Y62) (COPV).
OC Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes;
OC Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae;
OC Lambdapapillomavirus.
OX NCBI_TaxID=766192;
OH NCBI_TaxID=9615; Canis lupus familiaris (Dog) (Canis familiaris).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8076829; DOI=10.1016/0378-1119(94)90303-4;
RA Isegawa N., Nakano K., Ohta M., Shirasawa H., Tokita H., Simizu B.;
RT "Cloning and sequencing of the L1 gene of canine oral papillomavirus.";
RL Gene 146:261-265(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8091677; DOI=10.1006/viro.1994.1552;
RA Delius H., van Ranst M.A., Jenson A.B., zur Hausen H., Sundberg J.P.;
RT "Canine oral papillomavirus genomic sequence: a unique 1.5-kb intervening
RT sequence between the E2 and L2 open reading frames.";
RL Virology 204:447-452(1994).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Isegawa N., Ohta M., Shirasawa H., Tokita H., Simizu B., Yamaura A.;
RT "Nucleotide sequence of a canine oral papillomavirus containing a long
RT noncoding region.";
RL Int. J. Oncol. 7:155-159(1995).
CC -!- FUNCTION: Forms an icosahedral capsid with a T=7 symmetry and a 50 nm
CC diameter. The capsid is composed of 72 pentamers linked to each other
CC by disulfide bonds and associated with L2 proteins. Binds to heparan
CC sulfate proteoglycans on cell surface of basal layer keratinocytes to
CC provide initial virion attachment. This binding mediates a
CC conformational change in the virus capsid that facilitates efficient
CC infection. The virion enters the host cell via endocytosis. During
CC virus trafficking, L1 protein dissociates from the viral DNA and the
CC genomic DNA is released to the host nucleus. The virion assembly takes
CC place within the cell nucleus. Encapsulates the genomic DNA together
CC with protein L2. {ECO:0000255|HAMAP-Rule:MF_04002}.
CC -!- SUBUNIT: Self-assembles into homopentamers. The capsid has an
CC icosahedral symmetry and consists of 72 capsomers, with each capsomer
CC being a pentamer of L1. Interacts with the minor capsid protein L2;
CC this interaction is necessary for viral genome encapsidation. Interacts
CC with protein E2; this interaction enhances E2-dependent replication and
CC transcription activation. {ECO:0000255|HAMAP-Rule:MF_04002}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000255|HAMAP-Rule:MF_04002}. Host
CC nucleus {ECO:0000255|HAMAP-Rule:MF_04002}.
CC -!- SIMILARITY: Belongs to the papillomaviridae L1 protein family.
CC {ECO:0000255|HAMAP-Rule:MF_04002}.
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DR EMBL; D55633; BAA09503.1; -; Genomic_DNA.
DR EMBL; D26115; BAA05111.1; -; Genomic_DNA.
DR EMBL; L22695; AAA61750.1; -; Genomic_DNA.
DR RefSeq; NP_056819.1; NC_001619.1.
DR SMR; Q89828; -.
DR PRIDE; Q89828; -.
DR GeneID; 1497245; -.
DR KEGG; vg:1497245; -.
DR Proteomes; UP000008788; Genome.
DR Proteomes; UP000097271; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0039620; C:T=7 icosahedral viral capsid; IEA:UniProtKB-UniRule.
DR GO; GO:0005198; F:structural molecule activity; IEA:UniProtKB-UniRule.
DR GO; GO:0075509; P:endocytosis involved in viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0019062; P:virion attachment to host cell; IEA:UniProtKB-UniRule.
DR Gene3D; 2.60.175.20; -; 2.
DR HAMAP; MF_04002; PPV_L1; 1.
DR InterPro; IPR002210; Capsid_L1_Papillomavir.
DR InterPro; IPR036973; Capsid_L1_sf_Papillomavir.
DR InterPro; IPR011222; dsDNA_vir_gr_I_capsid.
DR Pfam; PF00500; Late_protein_L1; 1.
DR PRINTS; PR00865; HPVCAPSIDL1.
DR SUPFAM; SSF88648; SSF88648; 1.
PE 3: Inferred from homology;
KW Capsid protein; Disulfide bond; Host nucleus; Host-virus interaction;
KW Late protein; Reference proteome; T=7 icosahedral capsid protein;
KW Viral attachment to host cell; Viral penetration into host cytoplasm;
KW Virion; Virus endocytosis by host; Virus entry into host cell.
FT CHAIN 1..503
FT /note="Major capsid protein L1"
FT /id="PRO_0000133555"
FT REGION 270..289
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT DISULFID 178
FT /note="Interchain (with C-431)"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04002"
FT DISULFID 431
FT /note="Interchain (with C-178)"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04002"
SQ SEQUENCE 503 AA; 57310 MW; 1355F2C354DCA789 CRC64;
MAVWLPAQNK FYLPPQPSTK VLSTDEYVSR TNIFYHASSE RLLTVGHPFY EIYKEERSEE
VIVPKVSPNQ YRVFRLLLPD PNNFAFGDKS LFDPEKERLV WGLRGLEIGR GQPLGISVTG
HPTFDRYNDV ENPNKNLAGH GGGTDSRVNM GLDPKQTQMF MIGCKPALGE HWSLTRWCTG
QVHTAGQCPP IELRNTTIED GDMVDIGFGA MDFKALQHYK SGVPIDIVNS ACKYPDYLKM
ANEPYGDRCF FFVRREQLYA RHIMSRSGTQ GLEPVPKDTY ATREDNNIGT TNYFSTPSGS
LVSSEGQLFN RPYWIQRSQG KNNGIAWGNQ LFLTVVDNTR GTPLTINIGQ QDKPEEGNYV
PSSYRTYLRH VEEYEVSIIV QLCKVKLSPE NLAIIHTMDP NIIEDWHLNV TPPSGTLDDT
YRYINSLATK CPTNIPPKTN VDPFADFKFW EVDLKDKMTE QLDQTPLGRK FLFQTNVLRP
RSVKVRSTSH VSVKRKAVKR KRK