VNFD_AZOSA
ID VNFD_AZOSA Reviewed; 279 AA.
AC O68954;
DT 15-JUL-1999, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=Nitrogenase vanadium-iron protein alpha chain;
DE EC=1.18.6.1;
DE AltName: Full=Dinitrogenase 2 subunit alpha;
DE AltName: Full=Nitrogenase component I;
DE Flags: Fragment;
GN Name=vnfD;
OS Azotobacter salinestris.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Azotobacter.
OX NCBI_TaxID=69964;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=10420583; DOI=10.1139/w99-007;
RA Loveless T.M., Bishop P.E.;
RT "Identification of genes unique to Mo-independent nitrogenase systems in
RT diverse diazotrophs.";
RL Can. J. Microbiol. 45:312-317(1999).
CC -!- FUNCTION: This vanadium-iron protein is part of the nitrogenase complex
CC that catalyzes the key enzymatic reactions in nitrogen fixation.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=16 ATP + 16 H2O + N2 + 8 reduced [2Fe-2S]-[ferredoxin] = 16
CC ADP + 6 H(+) + H2 + 2 NH4(+) + 8 oxidized [2Fe-2S]-[ferredoxin] + 16
CC phosphate; Xref=Rhea:RHEA:21448, Rhea:RHEA-COMP:10000, Rhea:RHEA-
CC COMP:10001, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:17997,
CC ChEBI:CHEBI:18276, ChEBI:CHEBI:28938, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:33737, ChEBI:CHEBI:33738, ChEBI:CHEBI:43474,
CC ChEBI:CHEBI:456216; EC=1.18.6.1;
CC -!- COFACTOR:
CC Name=[8Fe-7S] cluster; Xref=ChEBI:CHEBI:21143; Evidence={ECO:0000250};
CC Note=Binds 1 [8Fe-7S] cluster per heterodimer. {ECO:0000250};
CC -!- COFACTOR:
CC Name=[7Fe-V-9S-C-homocitryl] cluster; Xref=ChEBI:CHEBI:60357;
CC Evidence={ECO:0000250};
CC Note=Binds 1 [7Fe-V-9S-C-homocitryl] cluster per subunit.
CC {ECO:0000250};
CC -!- SUBUNIT: Hexamer of two alpha, two beta, and two delta chains.
CC {ECO:0000250}.
CC -!- MISCELLANEOUS: The structure of the 7Fe-V-9S-C-homocitryl cluster is
CC assumed to be analogous to the 7Fe-Mo-9S-C-homocitryl cluster.
CC -!- SIMILARITY: Belongs to the NifD/NifK/NifE/NifN family. {ECO:0000305}.
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DR EMBL; AF058784; AAC14341.1; -; Genomic_DNA.
DR AlphaFoldDB; O68954; -.
DR SMR; O68954; -.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0018697; F:carbonyl sulfide nitrogenase activity; IEA:UniProtKB-EC.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016163; F:nitrogenase activity; IEA:UniProtKB-EC.
DR GO; GO:0009399; P:nitrogen fixation; IEA:UniProtKB-KW.
DR InterPro; IPR000510; Nase/OxRdtase_comp1.
DR InterPro; IPR005974; Nase_asu.
DR InterPro; IPR010143; Nase_comp1_asu.
DR InterPro; IPR000318; Nase_comp1_CS.
DR PANTHER; PTHR43457; PTHR43457; 1.
DR Pfam; PF00148; Oxidored_nitro; 1.
DR TIGRFAMs; TIGR01284; alt_nitrog_alph; 1.
DR PROSITE; PS00699; NITROGENASE_1_1; 1.
DR PROSITE; PS00090; NITROGENASE_1_2; 1.
PE 3: Inferred from homology;
KW ATP-binding; Iron; Iron-sulfur; Metal-binding; Nitrogen fixation;
KW Nucleotide-binding; Oxidoreductase; Vanadium.
FT CHAIN <1..>279
FT /note="Nitrogenase vanadium-iron protein alpha chain"
FT /id="PRO_0000153057"
FT BINDING 5
FT /ligand="[8Fe-7S] cluster"
FT /ligand_id="ChEBI:CHEBI:21143"
FT /ligand_note="ligand shared with beta chain"
FT /evidence="ECO:0000250"
FT BINDING 31
FT /ligand="[8Fe-7S] cluster"
FT /ligand_id="ChEBI:CHEBI:21143"
FT /ligand_note="ligand shared with beta chain"
FT /evidence="ECO:0000250"
FT BINDING 94
FT /ligand="[8Fe-7S] cluster"
FT /ligand_id="ChEBI:CHEBI:21143"
FT /ligand_note="ligand shared with beta chain"
FT /evidence="ECO:0000250"
FT BINDING 213
FT /ligand="[7Fe-V-9S-C-homocitryl] cluster"
FT /ligand_id="ChEBI:CHEBI:60357"
FT /evidence="ECO:0000250"
FT NON_TER 1
FT NON_TER 279
SQ SEQUENCE 279 AA; 31795 MW; 76618195F65A5E55 CRC64;
SERGCAFCGA KLVIGGVLKD TIQMIHGPLG CAYDTWHTKR YPTDNGHFNM KYVWSTDMKE
SHVVFGGEKR LEKSMHEAFD EMPDIKRMIV YTTCPTALIG DDIKAVAKKV MKDRPDVDVF
TVECPGFSGV SQSKGHHVLN IGWINEKVET MEKEITSEYT MNFIGDFNIQ GDTQLLQTYW
DRLGIQVVAH FTGNGTYDDL RCMHQAQLNV VNCARSSGYI ANELKKRYGI PRLDIDSWGF
NYMAEGIRKI CAFFGIEEKG EALIAEEYAK WKPKLDWYK