VP4A_LNYV3
ID VP4A_LNYV3 Reviewed; 300 AA.
AC Q9E7N7;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 29-SEP-2021, entry version 53.
DE RecName: Full=Phosphoprotein;
DE Short=Protein P;
DE AltName: Full=Protein 4a;
GN Name=P;
OS Lettuce necrotic yellows virus (isolate 318) (LNYV).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina;
OC Monjiviricetes; Mononegavirales; Rhabdoviridae; Betarhabdovirinae;
OC Cytorhabdovirus.
OX NCBI_TaxID=928304;
OH NCBI_TaxID=43191; Embergeria.
OH NCBI_TaxID=4236; Lactuca sativa (Garden lettuce).
OH NCBI_TaxID=43208; Reichardia tingitana.
OH NCBI_TaxID=255580; Sonchus hydrophilus.
OH NCBI_TaxID=50207; Sonchus oleraceus (Common sowthistle).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA / MRNA].
RX PubMed=16313992; DOI=10.1016/j.virusres.2005.10.024;
RA Dietzgen R.G., Callaghan B., Wetzel T., Dale J.L.;
RT "Completion of the genome sequence of Lettuce necrotic yellows virus, type
RT species of the genus Cytorhabdovirus.";
RL Virus Res. 118:16-22(2006).
CC -!- FUNCTION: Non catalytic polymerase cofactor and regulatory protein that
CC plays a role in viral transcription and replication. Stabilizes the RNA
CC polymerase L to the N-RNA template and binds the soluble protein N,
CC preventing it from encapsidating non-genomic RNA (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Homotrimer when phosphorylated. This trimer is stabilized by
CC binding to the L protein. Binds soluble protein N, and ribonucleocapsid
CC (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion. Host cytoplasm {ECO:0000250}.
CC -!- PTM: Phosphorylated by host kinases. {ECO:0000250}.
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DR EMBL; AF209035; AAG32648.1; -; mRNA.
DR EMBL; AJ867584; CAI30422.1; -; Genomic_RNA.
DR RefSeq; YP_425088.1; NC_007642.1.
DR PDB; 3T4R; X-ray; 2.00 A; A=230-300.
DR PDBsum; 3T4R; -.
DR SMR; Q9E7N7; -.
DR GeneID; 3844365; -.
DR KEGG; vg:3844365; -.
DR Proteomes; UP000008592; Genome.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
PE 1: Evidence at protein level;
KW 3D-structure; Chaperone; Host cytoplasm; Phosphoprotein;
KW Reference proteome; Viral RNA replication; Virion.
FT CHAIN 1..300
FT /note="Phosphoprotein"
FT /id="PRO_0000299209"
FT REGION 1..59
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 31..50
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT HELIX 231..241
FT /evidence="ECO:0007829|PDB:3T4R"
FT HELIX 246..249
FT /evidence="ECO:0007829|PDB:3T4R"
FT HELIX 254..260
FT /evidence="ECO:0007829|PDB:3T4R"
FT HELIX 263..268
FT /evidence="ECO:0007829|PDB:3T4R"
FT TURN 269..271
FT /evidence="ECO:0007829|PDB:3T4R"
FT HELIX 277..300
FT /evidence="ECO:0007829|PDB:3T4R"
SQ SEQUENCE 300 AA; 32499 MW; C64041C7E1E2FBDA CRC64;
MDSESLDFSS ADTVILRSPN AGTNPDGHPD TVECPDFDTD IPKTSDDSSK MDNKGSSSSS
KAVKDLLELA AKSQGIVVTD VMQNTAIALH HNLGLDASSL DWFVAGITFA NNSMIMEKMV
SAIKELQIEV RNIQVASSGI KGTSEELVSK MKANKNDIVK ELVKTRDSVL SAMGGILSAP
EIEQQPVKTV TIGASQGRRK STVVPPIEIN PELESPVLSK TVSTATPEER IRHEKEKLLA
DLDWEIGEIA QYTPLIVDFL VPDDILAMAA DGLTPELKEK IQNEIIENHI ALMALEEYSS