VP4_AQRVC
ID VP4_AQRVC Reviewed; 648 AA.
AC Q8JU57;
DT 08-FEB-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 23-FEB-2022, entry version 66.
DE RecName: Full=Outer capsid protein VP4;
GN Name=S6;
OS Aquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C).
OC Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes;
OC Reovirales; Reoviridae; Spinareovirinae; Aquareovirus.
OX NCBI_TaxID=185783;
OH NCBI_TaxID=28800; Notemigonus crysoleucas (Golden shiner) (Cyprinus crysoleucas).
OH NCBI_TaxID=90988; Pimephales promelas (Fathead minnow).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=12124458; DOI=10.1099/0022-1317-83-8-1941;
RA Attoui H., Fang Q., Mohd Jaafar F., Cantaloube J.F., Biagini P.,
RA de Micco P., de Lamballerie X.;
RT "Common evolutionary origin of aquareoviruses and orthoreoviruses revealed
RT by genome characterization of Golden shiner reovirus, Grass carp reovirus,
RT Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family
RT Reoviridae).";
RL J. Gen. Virol. 83:1941-1951(2002).
CC -!- FUNCTION: Interacts with VP7 to form the outer icosahedral capsid with
CC an incomplete T=13 symmetry, about 80 nm in diameter, and consisting of
CC 200 VP4-VP7 trimers. Myristoylated N-terminal peptide may be released
CC in the endosome and involved in permeabilization and delivery of
CC transcriptionally active viral particles into the host cell cytoplasm
CC (Potential). {ECO:0000305}.
CC -!- SUBUNIT: Interacts with VP6 and VP7. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- PTM: Cleaved during the endosomal proteolytic disassembly of the outer
CC capsid. {ECO:0000250}.
CC -!- PTM: N-terminally myristoylated. This acylation is essential for the
CC membrane fusion activity (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the aquareoviridae outer capsid VP4 protein
CC family. {ECO:0000305}.
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DR EMBL; AF403403; AAM92749.1; -; Genomic_RNA.
DR RefSeq; NP_938065.1; NC_005171.1.
DR SMR; Q8JU57; -.
DR MEROPS; N07.002; -.
DR GeneID; 2648334; -.
DR KEGG; vg:2648334; -.
DR Proteomes; UP000006713; Genome.
DR GO; GO:0039621; C:T=13 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0039624; C:viral outer capsid; IEA:UniProtKB-KW.
DR GO; GO:0046812; F:host cell surface binding; IEA:InterPro.
DR GO; GO:0039665; P:permeabilization of host organelle membrane involved in viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0099008; P:viral entry via permeabilization of inner membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.10.2040.10; -; 1.
DR Gene3D; 1.10.2050.10; -; 1.
DR Gene3D; 2.60.120.420; -; 1.
DR InterPro; IPR009113; Mu1/VP4.
DR InterPro; IPR036256; Mu1/VP4_sf.
DR InterPro; IPR015962; Mu1_membr_pen_domII.
DR InterPro; IPR044937; Mu1_membr_pen_domIII.
DR InterPro; IPR015960; Mu1_membr_pen_domIV.
DR Pfam; PF05993; Reovirus_M2; 1.
DR SUPFAM; SSF69908; SSF69908; 1.
PE 3: Inferred from homology;
KW Capsid protein; Glycoprotein; Lipoprotein; Myristate; Outer capsid protein;
KW Reference proteome; T=13 icosahedral capsid protein;
KW Viral penetration into host cytoplasm;
KW Viral penetration via permeabilization of host membrane; Virion;
KW Virus entry into host cell.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000255"
FT CHAIN 2..648
FT /note="Outer capsid protein VP4"
FT /id="PRO_0000404187"
FT SITE 42..43
FT /note="Cleavage"
FT /evidence="ECO:0000250"
FT LIPID 2
FT /note="N-myristoyl glycine; by host"
FT /evidence="ECO:0000250"
FT CARBOHYD 12
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 311
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 312
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 390
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 453
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
FT CARBOHYD 492
FT /note="N-linked (GlcNAc...) asparagine; by host"
FT /evidence="ECO:0000255"
SQ SEQUENCE 648 AA; 68555 MW; A6FA4DA4164826D2 CRC64;
MGNVQTSVNT YNITGDGNSF TPTSDMTSTA APAIDLKPGV LNPTGKLWRP VGTSVATIDS
LAIVSDRFGQ YSFVNEGMRE TFSKALFDIN MWQPLFQATK TGCGPIVLSS FTTTTSGYVG
ATAGDALDNP VTNGVFISTV QVMNLQRTIA ARMRDVALWQ QHLDTAMTML TPDISAGSAS
CNWKSLLAFA KDILPLDNLC LTYPNEFYNV AIHRYPALKP GNPDTKLPDA QAHPLGEVAG
AFNAATSEVG SLVGSSSTLS QAISTMAGKD LDLIEADTPL PVSVFTPSLA PRSYRPAFIK
PEDAKWIAEF NNSSLIRKTL TYSGATYAVQ LGPGPTRVID MNAMIDSVLT LDVSGTILPY
DTNPDLSTSV PAFVLIQTSV PIQQVTTAAN ITAITVVSAA GASAINLAIN VRGQPRFNML
HLQATFERET ITGIPYIYGL GTFLIPSPTS SSNFSNPTLM DGLLTVTPVL LRETTYKGEV
VDAIVPATVM ANQTSEEVAS ALANDAIVLV SNHLNKLANV VGDAIPVASK TDDSATSAIV
SRLAVQHKLS QVGQTSPTPP DYPLLWRRAK RAASMFVSNP SLALQVGIPV LTQSGMLSAL
TSGVGTALRT GSLGKGVTDA SEKLRARQSL TVAKQAFFDQ IGSLWPGK