VPS51_XENTR
ID VPS51_XENTR Reviewed; 760 AA.
AC Q4V9Y0;
DT 20-JAN-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2005, sequence version 1.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Vacuolar protein sorting-associated protein 51 homolog;
DE AltName: Full=Protein fat-free homolog;
GN Name=vps51; Synonyms=ffr;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in retrograde transport from early and late
CC endosomes to the late Golgi. The GARP complex is required for the
CC maintenance of protein retrieval from endosomes to the TGN, acid
CC hydrolase sorting, lysosome function, endosomal cholesterol traffic and
CC autophagy. Acts as component of the EARP complex that is involved in
CC endocytic recycling. {ECO:0000250|UniProtKB:Q9UID3}.
CC -!- SUBUNIT: Component of the Golgi-associated retrograde protein (GARP)
CC complex Component of the endosome-associated retrograde protein (EARP)
CC complex. {ECO:0000250|UniProtKB:Q9UID3}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus, trans-Golgi network
CC {ECO:0000250|UniProtKB:Q9UID3}. Recycling endosome
CC {ECO:0000250|UniProtKB:Q9UID3}. Note=Localizes to the trans-Golgi
CC network as part of the GARP complex, while it localizes to recycling
CC endosomes as part of the EARP complex. {ECO:0000250|UniProtKB:Q9UID3}.
CC -!- SIMILARITY: Belongs to the VPS51 family. {ECO:0000305}.
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DR EMBL; BC096636; AAH96636.1; -; mRNA.
DR RefSeq; NP_001027521.1; NM_001032350.1.
DR AlphaFoldDB; Q4V9Y0; -.
DR SMR; Q4V9Y0; -.
DR PaxDb; Q4V9Y0; -.
DR DNASU; 613113; -.
DR GeneID; 613113; -.
DR KEGG; xtr:613113; -.
DR CTD; 738; -.
DR Xenbase; XB-GENE-1005391; vps51.
DR eggNOG; KOG2346; Eukaryota.
DR InParanoid; Q4V9Y0; -.
DR OrthoDB; 1305393at2759; -.
DR Reactome; R-XTR-6811440; Retrograde transport at the Trans-Golgi-Network.
DR Proteomes; UP000008143; Chromosome 4.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0005829; C:cytosol; IEA:GOC.
DR GO; GO:1990745; C:EARP complex; ISS:UniProtKB.
DR GO; GO:0000938; C:GARP complex; ISS:UniProtKB.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR GO; GO:0055037; C:recycling endosome; ISS:UniProtKB.
DR GO; GO:0032456; P:endocytic recycling; ISS:UniProtKB.
DR GO; GO:0007030; P:Golgi organization; IBA:GO_Central.
DR GO; GO:0048193; P:Golgi vesicle transport; IBA:GO_Central.
DR GO; GO:0006869; P:lipid transport; IEA:UniProtKB-KW.
DR GO; GO:0007041; P:lysosomal transport; IBA:GO_Central.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR GO; GO:0042147; P:retrograde transport, endosome to Golgi; IBA:GO_Central.
DR InterPro; IPR016159; Cullin_repeat-like_dom_sf.
DR InterPro; IPR039481; EXOC2/Sec5_N_dom.
DR InterPro; IPR014812; Vps51.
DR PANTHER; PTHR15954; PTHR15954; 1.
DR Pfam; PF15469; Sec5; 1.
DR SUPFAM; SSF74788; SSF74788; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Endosome; Golgi apparatus; Lipid transport; Protein transport;
KW Reference proteome; Transport.
FT CHAIN 1..760
FT /note="Vacuolar protein sorting-associated protein 51
FT homolog"
FT /id="PRO_0000361542"
FT COILED 97..127
FT /evidence="ECO:0000255"
FT COILED 374..395
FT /evidence="ECO:0000255"
SQ SEQUENCE 760 AA; 85228 MW; 80000FA36D6F8F55 CRC64;
MATVSGTEEE ENAKKRKAHG MLKLYYGMTE EGKACERHLE PTDVDGVHFN PELYLTKLRK
ESSLSQLMDV EADMVRQIRS LDSEMQTLVY ENYNKFISAT DTIRKMKNDF KKMEDEMDGL
ATNMAVITEF SARISSTLQE RHQQITKLSG VHTLLRKLQF LFELPARLKK CIELGAYAQA
VSYHSKARSV LHQYQHMPSF HGIQTDCQAI MAGLADTLRQ RFRDPASSPQ DLSECVEMLL
NLEEPAHLLC DEFLAHGRGR LASHLSDLQE SGDILEFVDR GCGGFISDAC LLAASYQSLF
SKEAGSTAQM AEAKLTSFLE ELSTGYFELV EKRLRQEKSL GDNSLLVRAL DRFHRRLQAP
SKLVPGCGFN RRGTEIVVRA AQERLAQYLQ ALKDFFQGCL TDVRQALAAP RLPGKEMPAL
GDLLAGLSAS VLNQIKTVLA AVHLFTAKDV AFSDKPYFKG EFCSQGVREG LIVAFIKSVC
QTARQFCEIP GEKGTSTPPA LLLLLSRLCL DYETSTISYI LTLTDEQFLG QDHSPVTPVS
SLCSLARSTA QTLLNQYVKS QGLVVSQMLR KSVETRDWVT TIEPRNVRAV MKRVVEDITG
VDVQVGLLYE EGVRKAHSSD SSKRTFSVYS SSRLQGRYAQ SYTPSAPMDT NLLSNIQKLF
SERIDIFSTV QFNKVSILTG IIKISLKTFL ECVRLRTFGR YGLQQIQVDC HYLQLYLWRF
VSDENLVHCL LDEVVGSAAH RCLDPAPMEQ SVIEVICERG