VQ17_ARATH
ID VQ17_ARATH Reviewed; 172 AA.
AC O48522;
DT 04-MAR-2015, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 25-MAY-2022, entry version 111.
DE RecName: Full=VQ motif-containing protein 17 {ECO:0000303|PubMed:22535423};
DE Short=AtVQ17 {ECO:0000303|PubMed:22535423};
GN Name=VQ17 {ECO:0000303|PubMed:22535423};
GN OrderedLocusNames=At2g42140 {ECO:0000312|Araport:AT2G42140};
GN ORFNames=T24P15.5 {ECO:0000312|EMBL:AAB88639.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=12481096; DOI=10.1104/pp.010207;
RA Xiao Y.-L., Malik M., Whitelaw C.A., Town C.D.;
RT "Cloning and sequencing of cDNAs for hypothetical genes from chromosome 2
RT of Arabidopsis.";
RL Plant Physiol. 130:2118-2128(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP FUNCTION, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=22535423; DOI=10.1104/pp.112.196816;
RA Cheng Y., Zhou Y., Yang Y., Chi Y.J., Zhou J., Chen J.Y., Wang F., Fan B.,
RA Shi K., Zhou Y.H., Yu J.Q., Chen Z.;
RT "Structural and functional analysis of VQ motif-containing proteins in
RT Arabidopsis as interacting proteins of WRKY transcription factors.";
RL Plant Physiol. 159:810-825(2012).
CC -!- FUNCTION: May function as positive regulator of plant growth.
CC {ECO:0000305|PubMed:22535423}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9M9F0}.
CC -!- MISCELLANEOUS: Plants over-expressing VQ17 show stunted growth
CC phenotype. {ECO:0000269|PubMed:22535423}.
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DR EMBL; AC002561; AAB88639.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC10079.1; -; Genomic_DNA.
DR EMBL; AY102560; AAM76765.1; -; mRNA.
DR EMBL; AY074648; AAL69464.1; -; mRNA.
DR EMBL; AY954829; AAX55155.1; -; Genomic_DNA.
DR PIR; T00924; T00924.
DR RefSeq; NP_181744.1; NM_129777.4.
DR AlphaFoldDB; O48522; -.
DR STRING; 3702.AT2G42140.1; -.
DR PaxDb; O48522; -.
DR PRIDE; O48522; -.
DR EnsemblPlants; AT2G42140.1; AT2G42140.1; AT2G42140.
DR GeneID; 818814; -.
DR Gramene; AT2G42140.1; AT2G42140.1; AT2G42140.
DR KEGG; ath:AT2G42140; -.
DR Araport; AT2G42140; -.
DR TAIR; locus:2060030; AT2G42140.
DR eggNOG; ENOG502S3AS; Eukaryota.
DR HOGENOM; CLU_111794_1_0_1; -.
DR InParanoid; O48522; -.
DR OMA; YLPFTID; -.
DR OrthoDB; 1563143at2759; -.
DR PhylomeDB; O48522; -.
DR PRO; PR:O48522; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O48522; baseline and differential.
DR Genevisible; O48522; AT.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR InterPro; IPR008889; VQ.
DR InterPro; IPR039834; VQ17/VQ25.
DR InterPro; IPR039607; VQ_8/17/18/20/21/25.
DR PANTHER; PTHR33143; PTHR33143; 1.
DR PANTHER; PTHR33143:SF3; PTHR33143:SF3; 1.
DR Pfam; PF05678; VQ; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome.
FT CHAIN 1..172
FT /note="VQ motif-containing protein 17"
FT /id="PRO_0000432314"
FT REGION 60..97
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 51..60
FT /note="VQ"
FT /evidence="ECO:0000305"
FT COMPBIAS 70..84
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 172 AA; 19497 MW; 843600C4E682A34B CRC64;
MEIEATTVQK RRSLPTIAMH KQSRTLTKSK PKIRIIHIFA PEIIKTDVAN FREIVQNLTG
KQDHHHHDLP HQKGLKRNPR SRRSHDHHEV HDMNKSHGFC INSDEEEEGM VSMTWNGNGD
ESSGGFLNGL GDLDGFIQEL GEFPYLPFTI DPAVASSSHL HGNVFAEPHH YA
