VQ1_ARATH
ID VQ1_ARATH Reviewed; 98 AA.
AC Q1G3U8; A0MDM3; Q9SHH3;
DT 04-MAR-2015, integrated into UniProtKB/Swiss-Prot.
DT 27-JUN-2006, sequence version 1.
DT 03-AUG-2022, entry version 78.
DE RecName: Full=VQ motif-containing protein 1 {ECO:0000303|PubMed:22535423};
DE Short=AtVQ1 {ECO:0000303|PubMed:22535423};
GN Name=VQ1 {ECO:0000303|PubMed:22535423};
GN OrderedLocusNames=At1g17147 {ECO:0000312|Araport:AT1G17147};
GN ORFNames=F20D23.16 {ECO:0000312|EMBL:AAD50018.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [4]
RP INTERACTION WITH WRKY33, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=22535423; DOI=10.1104/pp.112.196816;
RA Cheng Y., Zhou Y., Yang Y., Chi Y.J., Zhou J., Chen J.Y., Wang F., Fan B.,
RA Shi K., Zhou Y.H., Yu J.Q., Chen Z.;
RT "Structural and functional analysis of VQ motif-containing proteins in
RT Arabidopsis as interacting proteins of WRKY transcription factors.";
RL Plant Physiol. 159:810-825(2012).
CC -!- FUNCTION: May modulate WRKY transcription factor activities.
CC {ECO:0000250|UniProtKB:Q9M9F0}.
CC -!- SUBUNIT: Interacts with WRKY33. {ECO:0000269|PubMed:22535423}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9M9F0}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD50018.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=ABK28010.1; Type=Erroneous termination; Note=Extended C-terminus.; Evidence={ECO:0000305};
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DR EMBL; AC007651; AAD50018.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002684; AEE29550.1; -; Genomic_DNA.
DR EMBL; DQ487486; ABF59320.1; -; Genomic_DNA.
DR EMBL; DQ652639; ABK28010.1; ALT_SEQ; Genomic_DNA.
DR PIR; D86307; D86307.
DR RefSeq; NP_001117300.1; NM_001123828.2.
DR AlphaFoldDB; Q1G3U8; -.
DR SMR; Q1G3U8; -.
DR STRING; 3702.AT1G17147.1; -.
DR PaxDb; Q1G3U8; -.
DR PRIDE; Q1G3U8; -.
DR ProteomicsDB; 242750; -.
DR EnsemblPlants; AT1G17147.1; AT1G17147.1; AT1G17147.
DR GeneID; 6240987; -.
DR Gramene; AT1G17147.1; AT1G17147.1; AT1G17147.
DR KEGG; ath:AT1G17147; -.
DR Araport; AT1G17147; -.
DR TAIR; locus:4515102541; AT1G17147.
DR HOGENOM; CLU_169898_0_0_1; -.
DR InParanoid; Q1G3U8; -.
DR OMA; GVRSEPM; -.
DR OrthoDB; 1503659at2759; -.
DR PhylomeDB; Q1G3U8; -.
DR PRO; PR:Q1G3U8; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q1G3U8; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR008889; VQ.
DR InterPro; IPR039608; VQ_1/10.
DR PANTHER; PTHR34777; PTHR34777; 1.
DR Pfam; PF05678; VQ; 1.
PE 1: Evidence at protein level;
KW Nucleus; Reference proteome.
FT CHAIN 1..98
FT /note="VQ motif-containing protein 1"
FT /id="PRO_0000432307"
FT MOTIF 27..36
FT /note="VQ"
FT /evidence="ECO:0000305"
SQ SEQUENCE 98 AA; 10895 MW; 75211DB9182A93F6 CRC64;
MSAGVRSEPM KVVFINTQYV QTDARSFKTI VQELTGKNAV VADGPYEFSG QGYGGKDSSQ
RFCGVGKEAE RGVETTEFDS FFREMPPVGE LYNLWSDH