VQ22_ARATH
ID VQ22_ARATH Reviewed; 192 AA.
AC Q9LIE6;
DT 04-MAR-2015, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=VQ motif-containing protein 22 {ECO:0000303|PubMed:22535423};
DE Short=AtVQ22 {ECO:0000303|PubMed:22535423};
GN Name=VQ22 {ECO:0000303|PubMed:22535423};
GN OrderedLocusNames=At3g22160 {ECO:0000312|Araport:AT3G22160};
GN ORFNames=MKA23.7 {ECO:0000312|EMBL:BAB03064.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP FUNCTION, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=22535423; DOI=10.1104/pp.112.196816;
RA Cheng Y., Zhou Y., Yang Y., Chi Y.J., Zhou J., Chen J.Y., Wang F., Fan B.,
RA Shi K., Zhou Y.H., Yu J.Q., Chen Z.;
RT "Structural and functional analysis of VQ motif-containing proteins in
RT Arabidopsis as interacting proteins of WRKY transcription factors.";
RL Plant Physiol. 159:810-825(2012).
CC -!- FUNCTION: May function as positive regulator of plant growth.
CC {ECO:0000305|PubMed:22535423}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9M9F0}.
CC -!- MISCELLANEOUS: Plants over-expressing VQ22 show stunted growth
CC phenotype. {ECO:0000269|PubMed:22535423}.
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DR EMBL; AP001306; BAB03064.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76595.1; -; Genomic_DNA.
DR EMBL; AY088580; AAM66111.1; -; mRNA.
DR RefSeq; NP_566699.1; NM_113113.4.
DR AlphaFoldDB; Q9LIE6; -.
DR STRING; 3702.AT3G22160.1; -.
DR PaxDb; Q9LIE6; -.
DR PRIDE; Q9LIE6; -.
DR ProteomicsDB; 242630; -.
DR EnsemblPlants; AT3G22160.1; AT3G22160.1; AT3G22160.
DR GeneID; 821780; -.
DR Gramene; AT3G22160.1; AT3G22160.1; AT3G22160.
DR KEGG; ath:AT3G22160; -.
DR Araport; AT3G22160; -.
DR TAIR; locus:2090389; AT3G22160.
DR eggNOG; ENOG502S4XE; Eukaryota.
DR HOGENOM; CLU_1404256_0_0_1; -.
DR InParanoid; Q9LIE6; -.
DR OMA; MANPNEW; -.
DR OrthoDB; 1399458at2759; -.
DR PhylomeDB; Q9LIE6; -.
DR PRO; PR:Q9LIE6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LIE6; baseline and differential.
DR Genevisible; Q9LIE6; AT.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR InterPro; IPR008889; VQ.
DR InterPro; IPR039831; VQ22.
DR InterPro; IPR039609; VQ_15/22.
DR PANTHER; PTHR33179; PTHR33179; 1.
DR PANTHER; PTHR33179:SF46; PTHR33179:SF46; 1.
DR Pfam; PF05678; VQ; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome.
FT CHAIN 1..192
FT /note="VQ motif-containing protein 22"
FT /id="PRO_0000432318"
FT REGION 24..65
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 101..135
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 163..192
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 76..85
FT /note="VQ"
FT /evidence="ECO:0000305"
FT COMPBIAS 24..48
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 101..127
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 171..192
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 192 AA; 20390 MW; BAEB1DC53C101D8F CRC64;
MANPNEWSQF YNNNQTFFTT STTASTAVTT TTAGDTTSID SRLSPETGRV TKPTRRRSRA
SRRTPTTLLN TDTSNFRAMV QQYTGGPSAM AFGSGNTTSA FSLTSSSDPS AGSSQQAPWQ
YNFQPHAPLQ PPQRPYMFSL NNVNPVVGYS NMNNPNTMVS GVFGTVDGSG GGGSAPSSKE
ATNSNSSSSR LQ