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CAL_BRARC
ID   CAL_BRARC               Reviewed;         254 AA.
AC   Q6R4S6;
DT   16-MAY-2012, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   25-MAY-2022, entry version 72.
DE   RecName: Full=Transcription factor CAULIFLOWER;
DE            Short=BccCAL;
DE   AltName: Full=Agamous-like MADS-box protein CAL;
GN   Name=CAL;
OS   Brassica rapa subsp. chinensis (Pak-choi) (Brassica chinensis).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=93385;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=cv. communis;
RA   He Y.-K., Cao W.-G., Liu P.-L., Shen R.-J.;
RL   Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   REVIEW, AND GENE FAMILY.
RX   PubMed=10835404; DOI=10.1093/genetics/155.2.855;
RA   Purugganan M.D., Boyles A.L., Suddith J.I.;
RT   "Variation and selection at the CAULIFLOWER floral homeotic gene
RT   accompanying the evolution of domesticated Brassica oleracea.";
RL   Genetics 155:855-862(2000).
CC   -!- FUNCTION: Probable transcription factor that promotes early floral
CC       meristem identity in synergy with APETALA1, FRUITFULL and LEAFY. Is
CC       required subsequently for the transition of an inflorescence meristem
CC       into a floral meristem. Seems to be partially redundant to the function
CC       of APETALA1 (By similarity). {ECO:0000250}.
CC   -!- SUBUNIT: Homodimer capable of binding to CArG-box sequences.
CC       {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00251}.
CC   -!- MISCELLANEOUS: CAULIFLOWER may contribute to the shape of the floral
CC       meristem. This trait has likely been selected by early farmers during
CC       the domestication of modified inflorescence structures.
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DR   EMBL; AY514045; AAS67303.1; -; mRNA.
DR   AlphaFoldDB; Q6R4S6; -.
DR   SMR; Q6R4S6; -.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0000977; F:RNA polymerase II transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR   GO; GO:0009908; P:flower development; IEA:UniProtKB-KW.
DR   GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   CDD; cd00265; MADS_MEF2_like; 1.
DR   Gene3D; 3.40.1810.10; -; 1.
DR   InterPro; IPR033896; MADS_MEF2-like.
DR   InterPro; IPR002487; TF_Kbox.
DR   InterPro; IPR002100; TF_MADSbox.
DR   InterPro; IPR036879; TF_MADSbox_sf.
DR   Pfam; PF01486; K-box; 1.
DR   Pfam; PF00319; SRF-TF; 1.
DR   PRINTS; PR00404; MADSDOMAIN.
DR   SMART; SM00432; MADS; 1.
DR   SUPFAM; SSF55455; SSF55455; 1.
DR   PROSITE; PS51297; K_BOX; 1.
DR   PROSITE; PS00350; MADS_BOX_1; 1.
DR   PROSITE; PS50066; MADS_BOX_2; 1.
PE   2: Evidence at transcript level;
KW   Activator; Coiled coil; Developmental protein; Differentiation;
KW   DNA-binding; Flowering; Nucleus; Transcription; Transcription regulation.
FT   CHAIN           1..254
FT                   /note="Transcription factor CAULIFLOWER"
FT                   /id="PRO_0000417146"
FT   DOMAIN          1..61
FT                   /note="MADS-box"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00251"
FT   DOMAIN          90..180
FT                   /note="K-box"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00629"
FT   REGION          182..205
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        184..205
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   254 AA;  29879 MW;  E9C35C7C55A3FB87 CRC64;
     MGRGRVEMKR IENKINRQVT FSKRRAGLLK KAHEISILCD AEVSLIVFSH KGKLFEYSSE
     SCMEKVLERY ERYSYAEKQL KAPDSHVNAQ TNWSMEYSRL KAKIELLERN QRHYLGEDLE
     SISIKELQNL EQQLDTSLKH IRSRKNQLMH ESLNHLQRKE KEILEENSML TKQIKERESI
     LRTHQNQSEQ QNRSHHVAPQ PQPQLNPYMI SHQASPFLNM GGMYQGEDPT AVRRNRLDLT
     LEPIYNCNLG YFAA
 
 
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