VVHA_VIBVU
ID VVHA_VIBVU Reviewed; 471 AA.
AC P19247;
DT 01-NOV-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2003, sequence version 2.
DT 25-MAY-2022, entry version 138.
DE RecName: Full=Cytolysin;
DE Flags: Precursor;
GN Name=vvhA; OrderedLocusNames=VV2_0404;
OS Vibrio vulnificus (strain CMCP6).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=216895;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=2370116; DOI=10.1128/iai.58.8.2706-2709.1990;
RA Yamamoto K., Wright A.C., Kaper J.B., Morris J.G. Jr.;
RT "The cytolysin gene of Vibrio vulnificus: sequence and relationship to the
RT Vibrio cholerae E1 Tor hemolysin gene.";
RL Infect. Immun. 58:2706-2709(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CMCP6;
RA Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.;
RT "Complete genome sequence of Vibrio vulnificus CMCP6.";
RL Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Bacterial hemolysins are exotoxins that attack blood cell
CC membranes and cause cell rupture by mechanisms not clearly defined.
CC -!- SIMILARITY: Belongs to the HlyA hemolysin family. {ECO:0000305}.
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DR EMBL; M34670; AAA03245.1; -; Unassigned_DNA.
DR EMBL; AE016796; AAO07360.2; -; Genomic_DNA.
DR PIR; A41478; A41478.
DR RefSeq; WP_011081361.1; NC_004460.2.
DR PDB; 4OWJ; X-ray; 2.00 A; A/B/C/D/E/F/G=338-471.
DR PDB; 4OWK; X-ray; 2.00 A; A/B/C/D/E/F/G=338-471.
DR PDB; 4OWL; X-ray; 2.10 A; A/B/C/D/E/F/G=338-471.
DR PDBsum; 4OWJ; -.
DR PDBsum; 4OWK; -.
DR PDBsum; 4OWL; -.
DR AlphaFoldDB; P19247; -.
DR SMR; P19247; -.
DR CAZy; CBM13; Carbohydrate-Binding Module Family 13.
DR TCDB; 1.C.14.1.3; the cytohemolysin (chl) family.
DR UniLectin; P19247; -.
DR PRIDE; P19247; -.
DR EnsemblBacteria; AAO07360; AAO07360; VV2_0404.
DR KEGG; vvu:VV2_0404; -.
DR HOGENOM; CLU_579932_0_0_6; -.
DR OMA; HVAFYLN; -.
DR PHI-base; PHI:6877; -.
DR PHI-base; PHI:8497; -.
DR Proteomes; UP000002275; Chromosome 2.
DR GO; GO:0005576; C:extracellular region; IEA:InterPro.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR GO; GO:0090729; F:toxin activity; IEA:UniProtKB-KW.
DR GO; GO:0044179; P:hemolysis in another organism; IEA:UniProtKB-KW.
DR CDD; cd00161; RICIN; 1.
DR InterPro; IPR016183; Leukocidin/Hemolysin_toxin.
DR InterPro; IPR036435; Leukocidin/porin_MspA_sf.
DR InterPro; IPR035992; Ricin_B-like_lectins.
DR InterPro; IPR000772; Ricin_B_lectin.
DR Pfam; PF07968; Leukocidin; 1.
DR Pfam; PF00652; Ricin_B_lectin; 1.
DR SMART; SM00458; RICIN; 1.
DR SUPFAM; SSF50370; SSF50370; 1.
DR SUPFAM; SSF56959; SSF56959; 1.
DR PROSITE; PS50231; RICIN_B_LECTIN; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cytolysis; Hemolysis; Lectin; Signal; Toxin; Virulence.
FT SIGNAL 1..20
FT CHAIN 21..471
FT /note="Cytolysin"
FT /id="PRO_0000013365"
FT DOMAIN 338..465
FT /note="Ricin B-type lectin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00174"
FT CONFLICT 13
FT /note="A -> R (in Ref. 1; AAA03245)"
FT /evidence="ECO:0000305"
FT CONFLICT 338
FT /note="A -> R (in Ref. 1; AAA03245)"
FT /evidence="ECO:0000305"
FT CONFLICT 435
FT /note="N -> S (in Ref. 1; AAA03245)"
FT /evidence="ECO:0000305"
FT STRAND 339..347
FT /evidence="ECO:0007829|PDB:4OWJ"
FT STRAND 351..357
FT /evidence="ECO:0007829|PDB:4OWJ"
FT STRAND 360..363
FT /evidence="ECO:0007829|PDB:4OWL"
FT STRAND 367..371
FT /evidence="ECO:0007829|PDB:4OWJ"
FT HELIX 377..379
FT /evidence="ECO:0007829|PDB:4OWJ"
FT STRAND 380..383
FT /evidence="ECO:0007829|PDB:4OWJ"
FT STRAND 389..391
FT /evidence="ECO:0007829|PDB:4OWJ"
FT STRAND 394..396
FT /evidence="ECO:0007829|PDB:4OWJ"
FT STRAND 398..401
FT /evidence="ECO:0007829|PDB:4OWJ"
FT STRAND 407..410
FT /evidence="ECO:0007829|PDB:4OWJ"
FT HELIX 416..418
FT /evidence="ECO:0007829|PDB:4OWJ"
FT STRAND 420..423
FT /evidence="ECO:0007829|PDB:4OWJ"
FT STRAND 426..429
FT /evidence="ECO:0007829|PDB:4OWJ"
FT STRAND 439..445
FT /evidence="ECO:0007829|PDB:4OWJ"
FT STRAND 448..453
FT /evidence="ECO:0007829|PDB:4OWJ"
FT HELIX 454..456
FT /evidence="ECO:0007829|PDB:4OWJ"
FT STRAND 462..466
FT /evidence="ECO:0007829|PDB:4OWJ"
SQ SEQUENCE 471 AA; 52899 MW; F5F41B504552BAFA CRC64;
MKKMTLFTLS LLATAVQVGA QEYVPIVEKP IYITSSKIKC VLHTSGDFNA TRDWCNAGAS
IDVRVNVAQM RSVQSATSDG FTPDAKIVRF TVDADKPGTG IHLVNELQQD HSWFQSWANR
RTYIGPFASS YDLWVKPVSG YTPKKARDLP QNENKNYQHR DTYGYSIGIN GKVGAEVNKD
GPKVGGEVSG SFTYNYSKTL VFDTKDYRIN NRSSLSDFDI SFEREFGECD ELRRQELGCY
FTAAHWGSGW VFDKTKFNPI SYSNFKPNYD VLYEAPVSET GVTDFEMGVK LNYRARFGTV
LPSALFSVYG SAGSSTNSST VKQRIRIDWN HPLFEAEAHV TLQSLSNNDL CLDVYGENGD
KTVAGGSVNG WSCHGSWNQV WGLDKEERYR SRVASDRCLT VNADKTLTVE QCGANLAQKW
YWEGDKLISR YVDGNNTRYL LNIVGGRNVQ VTPENEANQA RWKPTLQQVK L