WCAM_ECOLI
ID WCAM_ECOLI Reviewed; 464 AA.
AC P71244; P76378;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 2.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=Colanic acid biosynthesis protein WcaM;
DE Flags: Precursor;
GN Name=wcaM; Synonyms=yefK; OrderedLocusNames=b2043, JW2028;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12;
RX PubMed=8759852; DOI=10.1128/jb.178.16.4885-4893.1996;
RA Stevenson G., Andrianopoulos K., Hobbs M., Reeves P.R.;
RT "Organization of the Escherichia coli K-12 gene cluster responsible for
RT production of the extracellular polysaccharide colanic acid.";
RL J. Bacteriol. 178:4885-4893(1996).
RN [2]
RP SEQUENCE REVISION.
RC STRAIN=K12;
RA Reeves P.R.;
RL Submitted (APR-1998) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9097040; DOI=10.1093/dnares/3.6.379;
RA Itoh T., Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K.,
RA Kasai H., Kimura S., Kitakawa M., Kitagawa M., Makino K., Miki T.,
RA Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S., Nakamura Y.,
RA Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G., Seki Y.,
RA Sivasundaram S., Tagami H., Takeda J., Takemoto K., Wada C., Yamamoto Y.,
RA Horiuchi T.;
RT "A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 40.1-50.0 min region on the linkage map.";
RL DNA Res. 3:379-392(1996).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [6]
RP EXPORT VIA THE TAT-SYSTEM.
RX PubMed=17218314; DOI=10.1074/jbc.m610507200;
RA Tullman-Ercek D., DeLisa M.P., Kawarasaki Y., Iranpour P., Ribnicky B.,
RA Palmer T., Georgiou G.;
RT "Export pathway selectivity of Escherichia coli twin arginine translocation
RT signal peptides.";
RL J. Biol. Chem. 282:8309-8316(2007).
CC -!- PATHWAY: Slime biogenesis; slime polysaccharide biosynthesis.
CC -!- PTM: Exported by the Tat system. The position of the signal peptide
CC cleavage has not been experimentally proven.
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DR EMBL; U38473; AAC77852.1; -; Genomic_DNA.
DR EMBL; U00096; AAC75104.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA15897.1; -; Genomic_DNA.
DR PIR; B64970; B64970.
DR RefSeq; NP_416547.1; NC_000913.3.
DR RefSeq; WP_001116026.1; NZ_LN832404.1.
DR AlphaFoldDB; P71244; -.
DR SMR; P71244; -.
DR BioGRID; 4259677; 196.
DR IntAct; P71244; 4.
DR STRING; 511145.b2043; -.
DR PaxDb; P71244; -.
DR PRIDE; P71244; -.
DR EnsemblBacteria; AAC75104; AAC75104; b2043.
DR EnsemblBacteria; BAA15897; BAA15897; BAA15897.
DR GeneID; 946561; -.
DR KEGG; ecj:JW2028; -.
DR KEGG; eco:b2043; -.
DR PATRIC; fig|1411691.4.peg.208; -.
DR EchoBASE; EB2521; -.
DR eggNOG; ENOG502Z7QB; Bacteria.
DR HOGENOM; CLU_046699_0_0_6; -.
DR OMA; YDNDYPE; -.
DR PhylomeDB; P71244; -.
DR BioCyc; EcoCyc:G7094-MON; -.
DR UniPathway; UPA00936; -.
DR PRO; PR:P71244; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0009103; P:lipopolysaccharide biosynthetic process; IEA:UniProtKB-KW.
DR GO; GO:0045228; P:slime layer polysaccharide biosynthetic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 2.160.20.10; -; 1.
DR InterPro; IPR023882; Colanic_acid_synth_WcaM.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR SUPFAM; SSF51126; SSF51126; 1.
DR TIGRFAMs; TIGR04004; WcaM; 1.
PE 3: Inferred from homology;
KW Lipopolysaccharide biosynthesis; Reference proteome; Signal.
FT SIGNAL 1..28
FT /note="Tat-type signal"
FT /evidence="ECO:0000255"
FT CHAIN 29..464
FT /note="Colanic acid biosynthesis protein WcaM"
FT /id="PRO_0000065958"
SQ SEQUENCE 464 AA; 51316 MW; 72A7655DC07368BE CRC64;
MPFKKLSRRT FLTASSALAF LHTPFARALP ARQSVNINDY NPHDWIASFK QAFSEGQTVV
VPAGLVCDNI NTGIFIPPGK TLHILGSLRG NGRGRFVLQD GSQVTGEDGG SMHNITLDVR
GSDCTIKGLT MSGFGPVTQI YIGGKNKRVM RNLIIDNLTV SHANYAILRQ GFHNQIIGAN
ITNCKFSDLQ GDAIEWNVAI NDRDILISDH VIERINCTNG KINWGIGIGL AGSTYDNNYP
EDQAVKNFVV ANITGSDCRQ LIHVENGKHF VIRNIKARNI TPDFSKKAGI DNATVAIYGC
DNFVIDNIEM INSAGMLIGY GVIKGKYLSI PQNFRVNDIQ LDNTHLAYKL RGIQISAGNA
VSFVALTNIE MKRASLELHN KPQHFFMRNI NVMQESSVGP ALSMNFDMRK DVRGVFMAKK
ETLLSLANVH AVNEKGQSSV DIDRINHHIV NVEKINFRLP ELRE