WDR12_DROYA
ID WDR12_DROYA Reviewed; 420 AA.
AC B4P116; Q6XIB0;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 23-SEP-2008, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Ribosome biogenesis protein WDR12 homolog {ECO:0000255|HAMAP-Rule:MF_03029};
GN ORFNames=GE13328;
OS Drosophila yakuba (Fruit fly).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC Drosophilidae; Drosophila; Sophophora.
OX NCBI_TaxID=7245;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tai18E2 / Tucson 14021-0261.01;
RX PubMed=17994087; DOI=10.1038/nature06341;
RG Drosophila 12 genomes consortium;
RT "Evolution of genes and genomes on the Drosophila phylogeny.";
RL Nature 450:203-218(2007).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 229-420.
RX PubMed=14525923; DOI=10.1101/gr.1311003;
RA Domazet-Loso T., Tautz D.;
RT "An evolutionary analysis of orphan genes in Drosophila.";
RL Genome Res. 13:2213-2219(2003).
CC -!- FUNCTION: Required for maturation of ribosomal RNAs and formation of
CC the large ribosomal subunit. {ECO:0000255|HAMAP-Rule:MF_03029}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000255|HAMAP-
CC Rule:MF_03029}. Nucleus, nucleoplasm {ECO:0000255|HAMAP-Rule:MF_03029}.
CC -!- SIMILARITY: Belongs to the WD repeat WDR12/YTM1 family.
CC {ECO:0000255|HAMAP-Rule:MF_03029}.
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DR EMBL; CM000157; EDW87991.1; -; Genomic_DNA.
DR EMBL; AY231921; AAR09944.1; -; mRNA.
DR RefSeq; XP_002088279.1; XM_002088243.2.
DR AlphaFoldDB; B4P116; -.
DR SMR; B4P116; -.
DR STRING; 7245.FBpp0258338; -.
DR EnsemblMetazoa; FBtr0259846; FBpp0258338; FBgn0068268.
DR GeneID; 6527185; -.
DR KEGG; dya:Dyak_GE13328; -.
DR eggNOG; KOG0313; Eukaryota.
DR HOGENOM; CLU_000288_57_0_1; -.
DR OMA; VDCTRTK; -.
DR OrthoDB; 1540178at2759; -.
DR PhylomeDB; B4P116; -.
DR Proteomes; UP000002282; Chromosome 2L.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0070545; C:PeBoW complex; ISS:UniProtKB.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IEA:UniProtKB-UniRule.
DR GO; GO:0043021; F:ribonucleoprotein complex binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
DR Gene3D; 2.130.10.10; -; 3.
DR HAMAP; MF_03029; WDR12; 1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR012972; NLE.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR028599; WDR12/Ytm1.
DR Pfam; PF08154; NLE; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Repeat; Ribosome biogenesis; rRNA processing; WD repeat.
FT CHAIN 1..420
FT /note="Ribosome biogenesis protein WDR12 homolog"
FT /id="PRO_0000369566"
FT REPEAT 104..142
FT /note="WD 1"
FT REPEAT 143..185
FT /note="WD 2"
FT REPEAT 192..231
FT /note="WD 3"
FT REPEAT 250..288
FT /note="WD 4"
FT REPEAT 290..329
FT /note="WD 5"
FT REPEAT 335..375
FT /note="WD 6"
FT REPEAT 379..417
FT /note="WD 7"
FT REGION 10..92
FT /note="Ubiquitin-like (UBL) domain"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03029"
SQ SEQUENCE 420 AA; 47125 MW; 5685B849E3C1A5CF CRC64;
MDVENGEGQV QVHLKTKQEH YAVPDVPYAI DGTVTTVELN TFVNALLRQK DGSSDTDFDF
LVFDEYLRGR LCDHLREKAI SFEDAIEIEY VERFPAPEPQ DCLLHDDWVS AVKASGKWIL
SGCYDNTLNL WTNKGKHILT ISGHTAPIKA VDWISLDEET GRFVSTSQDQ TAMLWQWNVG
SNSVECVSVC KGHERGVDSV SVSPDGLRFA TGSWDTMLKV WSAEVEDAVE GSSKRMKESG
VRTPKITLQG HRESVSAVQW MDASTLLTGS WDHTLKVWDL SLEGIKTEIS TNKSIFDASY
SKLNRLILTA SADKNLRLYD PRTNQGSVVR NTYLGHNAWV QTVMWSTTEE FLFVSGAYDN
QNKLWDCRSP KAPLYDLLGH GEKVLDIDWS NPKYIVSGGV DNTVRVFKSR KALADDAETK