WDR46_CANLF
ID WDR46_CANLF Reviewed; 612 AA.
AC Q5TJE7;
DT 06-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 84.
DE RecName: Full=WD repeat-containing protein 46;
GN Name=WDR46; Synonyms=C12H6orf11;
OS Canis lupus familiaris (Dog) (Canis familiaris).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis.
OX NCBI_TaxID=9615;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Doberman pinscher;
RX PubMed=15607421; DOI=10.1016/j.ygeno.2004.09.009;
RA Debenham S.L., Hart E.A., Ashurst J.L., Howe K.L., Quail M.A.,
RA Ollier W.E.R., Binns M.M.;
RT "Genomic sequence of the class II region of the canine MHC: comparison with
RT the MHC of other mammalian species.";
RL Genomics 85:48-59(2005).
CC -!- FUNCTION: Scaffold component of the nucleolar structure. Required for
CC localization of DDX21 and NCL to the granular compartment of the
CC nucleolus. {ECO:0000250|UniProtKB:O15213}.
CC -!- SUBUNIT: Interacts with DDX21, NCL, NOP2 and EBNA1BP2.
CC {ECO:0000250|UniProtKB:O15213}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000250|UniProtKB:O15213}.
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DR EMBL; AJ630366; CAI11441.1; -; Genomic_DNA.
DR AlphaFoldDB; Q5TJE7; -.
DR SMR; Q5TJE7; -.
DR STRING; 9612.ENSCAFP00000001360; -.
DR PaxDb; Q5TJE7; -.
DR Ensembl; ENSCAFT00030024261; ENSCAFP00030021163; ENSCAFG00030013122.
DR Ensembl; ENSCAFT00040038819; ENSCAFP00040033858; ENSCAFG00040020928.
DR Ensembl; ENSCAFT00845037081; ENSCAFP00845029039; ENSCAFG00845021010.
DR VEuPathDB; HostDB:ENSCAFG00845021010; -.
DR VGNC; VGNC:48369; WDR46.
DR eggNOG; KOG1272; Eukaryota.
DR GeneTree; ENSGT00390000007075; -.
DR InParanoid; Q5TJE7; -.
DR Proteomes; UP000002254; Chromosome 12.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR012952; BING4_C_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR040315; WDR46/Utp7.
DR PANTHER; PTHR14085; PTHR14085; 1.
DR Pfam; PF08149; BING4CT; 1.
DR SMART; SM01033; BING4CT; 1.
DR SMART; SM00320; WD40; 3.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 3: Inferred from homology;
KW Nucleus; Phosphoprotein; Reference proteome; Repeat; WD repeat.
FT CHAIN 1..612
FT /note="WD repeat-containing protein 46"
FT /id="PRO_0000051394"
FT REPEAT 215..273
FT /note="WD 1"
FT REPEAT 275..313
FT /note="WD 2"
FT REPEAT 316..355
FT /note="WD 3"
FT REPEAT 358..397
FT /note="WD 4"
FT REPEAT 400..437
FT /note="WD 5"
FT REGION 1..134
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 539..612
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 46..60
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 568..612
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 41
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:O15213"
SQ SEQUENCE 612 AA; 68817 MW; 83FF8A172C56311B CRC64;
METASKPGRD VQPKKARLQT KKKKPRRYWE KEATLTAAGA SPGPPRNKKR NRELRPQRPK
NINLPKKSRI PGKPQFPKKP REQRNLEPQR NLSGAQDPFP GPAPIPEEVA RKFRRIDKSK
KLPHSKSKTR SRLEVAEAEE EEISIKAARS ELLLAEEPGF LEGEDGEDTA KIRQAEIVEA
VDIASAAKHF DLNLRQFGPY RLNYSPVGRH LAFGGHRGHV ATLDWVTKRL MCEINVMEAV
RDIRFLHSEA LFAVAQNRWL HIYDNQGIEL HCIRRCDRVT RLEFLPFHFL LATASETGFL
TYLDVSVGKI VAALNARAGR LDVMTKNPYN AVIHLGHSNG TVSLWSPAMK EPLAKILCHR
GGVRAVAVDS TGTYMATSGL DHQLKIFDLR GMFQPLSART LPQGAGHLAF SQRGLLAAGM
SDVVNIWMGQ GMASPPSLEQ PYLTHRLSGH VHGLHFCPFE DVLGLGHSGG ITSMLVPGAA
EPNFDGLENN PYRSQKQRQE WEVKALLEKV PAELICLDPR ALAEVDVISL EQEKKERIER
LGYDPEAKAP FQPKPKQKGR SSTASLVKRR RKVMDKEHRD KVRQSLEQQP QKQEKKAKPL
KARPSALDRF VR