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WDR62_MOUSE
ID   WDR62_MOUSE             Reviewed;        1523 AA.
AC   Q3U3T8; Q6PGG0; Q7TQE9;
DT   03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT   03-APR-2007, sequence version 2.
DT   03-AUG-2022, entry version 111.
DE   RecName: Full=WD repeat-containing protein 62;
GN   Name=Wdr62;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC   STRAIN=NOD;
RX   PubMed=16141072; DOI=10.1126/science.1112014;
RA   Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA   Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA   Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA   Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA   Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA   Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA   Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA   Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA   Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA   Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA   Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA   Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA   Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA   Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA   Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA   Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA   Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA   Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA   Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA   Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA   Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA   Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA   Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA   Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA   Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA   van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA   Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA   Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA   Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA   Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA   Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA   Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA   Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA   Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT   "The transcriptional landscape of the mammalian genome.";
RL   Science 309:1559-1563(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), AND NUCLEOTIDE SEQUENCE
RP   [LARGE SCALE MRNA] OF 446-1523 (ISOFORM 3).
RC   STRAIN=C57BL/6J; TISSUE=Brain;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [3]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-33; SER-966; SER-972 AND
RP   SER-1143, AND IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Lung, Spleen, and Testis;
RX   PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA   Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA   Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT   "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL   Cell 143:1174-1189(2010).
RN   [4]
RP   TISSUE SPECIFICITY.
RX   PubMed=20729831; DOI=10.1038/nature09327;
RA   Bilguvar K., Ozturk A.K., Louvi A., Kwan K.Y., Choi M., Tatli B.,
RA   Yalnizoglu D., Tuysuz B., Caglayan A.O., Gokben S., Kaymakcalan H.,
RA   Barak T., Bakircioglu M., Yasuno K., Ho W., Sanders S., Zhu Y., Yilmaz S.,
RA   Dincer A., Johnson M.H., Bronen R.A., Kocer N., Per H., Mane S.,
RA   Pamir M.N., Yalcinkaya C., Kumandas S., Topcu M., Ozmen M., Sestan N.,
RA   Lifton R.P., State M.W., Gunel M.;
RT   "Whole-exome sequencing identifies recessive WDR62 mutations in severe
RT   brain malformations.";
RL   Nature 467:207-210(2010).
CC   -!- FUNCTION: Required for cerebral cortical development. Plays a role in
CC       neuronal proliferation and migration (By similarity). Plays a role in
CC       mother-centriole-dependent centriole duplication; the function seems
CC       also to involve CEP152, CDK5RAP2 and CEP63 through a stepwise assembled
CC       complex at the centrosome that recruits CDK2 required for centriole
CC       duplication (By similarity). {ECO:0000250|UniProtKB:O43379}.
CC   -!- SUBUNIT: Can form homodimers (via C-terminus). Interacts (via C-
CC       terminus) with MAPKBP1 (via C-terminus). Interacts with CDK5RAP2,
CC       CEP152, CEP63 and KIAA0753. CEP63, CDK5RAP2, CEP152, WDR62 are proposed
CC       to form a stepwise assembled complex at the centrosome forming a ring
CC       near parental centrioles. {ECO:0000250|UniProtKB:O43379}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:O43379}.
CC       Cytoplasm, cytoskeleton, spindle pole {ECO:0000250|UniProtKB:O43379}.
CC       Cytoplasm, cytoskeleton, microtubule organizing center, centrosome
CC       {ECO:0000250|UniProtKB:O43379}. Cytoplasm, cytoskeleton, microtubule
CC       organizing center, centrosome, centriole
CC       {ECO:0000250|UniProtKB:O43379}. Note=Shows cell cycle-dependent
CC       localization. Accumulates to the spindle pole during mitosis (By
CC       similarity). Colocalizes with CDK5RAP2, CEP152 and WDR62 in a discrete
CC       ring around the proximal end of the parental centriole. At this site, a
CC       cohesive structure is predicted to engage parental centrioles and
CC       procentrioles (By similarity). {ECO:0000250|UniProtKB:O43379}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=3;
CC       Name=1;
CC         IsoId=Q3U3T8-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q3U3T8-2; Sequence=VSP_024082, VSP_024084;
CC       Name=3;
CC         IsoId=Q3U3T8-3; Sequence=VSP_024081, VSP_024083;
CC   -!- TISSUE SPECIFICITY: Prominent in neural crest lineages from 9.5 dpc to
CC       11.5 dpc. Also expressed in the ventricular and subventricular zones
CC       during the period of cerebral cortical neurogenesis (11.5-16.5 dpc),
CC       with expression decreasing in intensity by 17.5 dpc. In the cerebellum,
CC       it is strongly expressed in precursors of granule neurons at late
CC       embryonic and early postnatal stages; by postnatal day 9 (P9). Present
CC       in fetal brain, enriched within the ventricular and subventricular zone
CC       (at protein level). {ECO:0000269|PubMed:20729831}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAH57041.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC       Sequence=BAE32697.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; AK154592; BAE32697.1; ALT_INIT; mRNA.
DR   EMBL; BC054747; AAH54747.1; -; mRNA.
DR   EMBL; BC057041; AAH57041.1; ALT_INIT; mRNA.
DR   CCDS; CCDS52178.1; -. [Q3U3T8-1]
DR   AlphaFoldDB; Q3U3T8; -.
DR   SMR; Q3U3T8; -.
DR   IntAct; Q3U3T8; 3.
DR   MINT; Q3U3T8; -.
DR   STRING; 10090.ENSMUSP00000103825; -.
DR   iPTMnet; Q3U3T8; -.
DR   PhosphoSitePlus; Q3U3T8; -.
DR   EPD; Q3U3T8; -.
DR   jPOST; Q3U3T8; -.
DR   MaxQB; Q3U3T8; -.
DR   PaxDb; Q3U3T8; -.
DR   PRIDE; Q3U3T8; -.
DR   ProteomicsDB; 299746; -. [Q3U3T8-1]
DR   ProteomicsDB; 299747; -. [Q3U3T8-2]
DR   ProteomicsDB; 299748; -. [Q3U3T8-3]
DR   MGI; MGI:1923696; Wdr62.
DR   eggNOG; KOG1408; Eukaryota.
DR   InParanoid; Q3U3T8; -.
DR   PhylomeDB; Q3U3T8; -.
DR   ChiTaRS; Wdr62; mouse.
DR   PRO; PR:Q3U3T8; -.
DR   Proteomes; UP000000589; Unplaced.
DR   RNAct; Q3U3T8; protein.
DR   GO; GO:0034451; C:centriolar satellite; ISO:MGI.
DR   GO; GO:0005814; C:centriole; IEA:UniProtKB-SubCell.
DR   GO; GO:0005813; C:centrosome; ISO:MGI.
DR   GO; GO:0005829; C:cytosol; ISO:MGI.
DR   GO; GO:0072686; C:mitotic spindle; IBA:GO_Central.
DR   GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR   GO; GO:0000922; C:spindle pole; ISO:MGI.
DR   GO; GO:0007099; P:centriole replication; ISO:MGI.
DR   GO; GO:0021987; P:cerebral cortex development; ISS:UniProtKB.
DR   GO; GO:0007052; P:mitotic spindle organization; ISO:MGI.
DR   GO; GO:0022008; P:neurogenesis; ISO:MGI.
DR   GO; GO:0097150; P:neuronal stem cell population maintenance; ISO:MGI.
DR   GO; GO:0002052; P:positive regulation of neuroblast proliferation; ISO:MGI.
DR   GO; GO:2001224; P:positive regulation of neuron migration; ISO:MGI.
DR   GO; GO:0046605; P:regulation of centrosome cycle; ISO:MGI.
DR   GO; GO:0045664; P:regulation of neuron differentiation; ISO:MGI.
DR   Gene3D; 2.130.10.10; -; 4.
DR   InterPro; IPR024977; Apc4_WD40_dom.
DR   InterPro; IPR011047; Quinoprotein_ADH-like_supfam.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR001680; WD40_repeat.
DR   Pfam; PF12894; ANAPC4_WD40; 1.
DR   Pfam; PF00400; WD40; 3.
DR   SMART; SM00320; WD40; 12.
DR   SUPFAM; SSF50998; SSF50998; 1.
DR   PROSITE; PS50082; WD_REPEATS_2; 1.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE   1: Evidence at protein level;
KW   Acetylation; Alternative splicing; Cytoplasm; Cytoskeleton; Nucleus;
KW   Phosphoprotein; Reference proteome; Repeat; WD repeat.
FT   INIT_MET        1
FT                   /note="Removed"
FT                   /evidence="ECO:0000250|UniProtKB:O43379"
FT   CHAIN           2..1523
FT                   /note="WD repeat-containing protein 62"
FT                   /id="PRO_0000281880"
FT   REPEAT          109..150
FT                   /note="WD 1"
FT   REPEAT          153..194
FT                   /note="WD 2"
FT   REPEAT          196..234
FT                   /note="WD 3"
FT   REPEAT          291..330
FT                   /note="WD 4"
FT   REPEAT          357..396
FT                   /note="WD 5"
FT   REPEAT          411..450
FT                   /note="WD 6"
FT   REPEAT          490..529
FT                   /note="WD 7"
FT   REPEAT          532..574
FT                   /note="WD 8"
FT   REPEAT          578..618
FT                   /note="WD 9"
FT   REPEAT          626..665
FT                   /note="WD 10"
FT   REPEAT          671..713
FT                   /note="WD 11"
FT   REPEAT          714..752
FT                   /note="WD 12"
FT   REPEAT          803..846
FT                   /note="WD 13"
FT   REGION          762..824
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1000..1072
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1143..1258
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        762..793
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1167..1184
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1196..1237
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         2
FT                   /note="N-acetylalanine"
FT                   /evidence="ECO:0000250|UniProtKB:O43379"
FT   MOD_RES         33
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         46
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:O43379"
FT   MOD_RES         501
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O43379"
FT   MOD_RES         966
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         972
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         1072
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:O43379"
FT   MOD_RES         1117
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O43379"
FT   MOD_RES         1143
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:21183079"
FT   MOD_RES         1169
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O43379"
FT   MOD_RES         1234
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:O43379"
FT   VAR_SEQ         913..934
FT                   /note="Missing (in isoform 3)"
FT                   /evidence="ECO:0000303|PubMed:15489334"
FT                   /id="VSP_024081"
FT   VAR_SEQ         1046..1075
FT                   /note="GKPEYPSTEELSQPELPGLGNGSLPQTPEQ -> ASSAVTQSADKSSPPCLP
FT                   SRVPKYRRAFPA (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:15489334"
FT                   /id="VSP_024082"
FT   VAR_SEQ         1046..1048
FT                   /note="Missing (in isoform 3)"
FT                   /evidence="ECO:0000303|PubMed:15489334"
FT                   /id="VSP_024083"
FT   VAR_SEQ         1076..1523
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:15489334"
FT                   /id="VSP_024084"
FT   CONFLICT        136
FT                   /note="T -> A (in Ref. 2; AAH54747)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        647
FT                   /note="C -> F (in Ref. 2; AAH57041)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   1523 AA;  167283 MW;  28F92D7F102F9D08 CRC64;
     MAALAAGGYT RSDTIEKLSS VMAGVPARRN QSSPPPAPPL CLRRRTRLAA APEDTVQNRV
     TLEKVLGITA QNSSGLTCDP GTGHVAYLAG CVVVVLNPKE NKQQHIFNTT RKSLSALAFS
     PDGKYIVTGE NGHRPTVRIW DVEEKTQVAE MLGHKYGVAC VAFSPNMKHI VSMGYQHDMV
     LNVWDWKKDI VVASNKVSCR VIALSFSEDS SYFVTVGNRH VRFWFLEAST EAKVTSTVPL
     VGRSGILGEL HNNIFCGVAC GRGRMAGNTF CVSYSGLLCQ FNEKRVLDKW INLKVSLSSC
     LCVSDELIFC GCTDGIVRIF QAHSLLYLTN LPKPHYLGVD VAHGLDSSFL FHRKAEAVYP
     DTVALTFDPV HQWLSCVYKD HSIYIWDVKD IDEVSKIWSE LFHSSFVWNV EVYPEFEDQR
     ACLPSGTFLT CSSDNTIRFW NLDSASDTRW QKNIFSDSLL KVVYVENDIQ HLQDLSHFPD
     RGSENGTPMD MKAGVRVMQV SPDGQHLASG DRSGNLRIHE LHFMDELIKV EAHDAEVLCL
     EYSKPETGVT LLASASRDRL IHVLNVEKNY NLEQTLDDHS SSITAIKFAG TRDVQMISCG
     ADKSIYFRSA QQASDGLHFV RTHHVAEKTT LYDMDIDITQ KYVAVACQDR NVRVYNTVSG
     KQKKCYKGSQ GDEGSLLKVH VDPSGTFLAT SCSDKSISLI DFYSGECVAK MFGHSEIVTG
     MKFTYDCRHL ITVSGDSCVF IWHLGPEITT CMKQHLLEIN HQEQQQQPKD QKWSGPPSQE
     TYASTPSEIR SLSPGEQTED EMEEECEPEE LLKTPSKDSL DPDPRCLLTN GKLPLWAKRL
     LGDDDVADSS AFHAKRSYQP HGRWAERAEQ EPLKTILDAW SLDSYFTPMK PENLQDSVLD
     SVEPQNLAGL LSECSLGNGH TSPGEGLVSY LLHPELGSPK EDNRGHPSYL PLQREATEAS
     ELILCSPEAE VSLTGMHREY YEEETEAGPE DQQGDTYLRV SSVSSKDQSP PEDSGESEAE
     LECSFAAAHS SAPQTDPGPH LTMTAGKPEY PSTEELSQPE LPGLGNGSLP QTPEQEKFLR
     HHFETLTDAP TEELFHGSLG DIKISETEDY FFNPRLSIST QFLSRLQKTS RCPPRLPLHL
     MKSPEAQPVG QGGNQPKAGP LRAGTGYMSS DGTNVLSGQK AEETQEALSL LDRKPPTPTS
     VLTTGREQSI SAPSSCSYLE STTSSHAKTT RSISLGDSEG PVTAELPQSL HKPLSPGQEL
     QAIPTTVALT SSIKDHEPAP LSWGNHEARA SLKLTLSSVC EQLLSPPPQE PPITHVWSQE
     PVDVPPSMAV TVASFCAPSP VDMSTLGLHS SMFLPKTSAS GPLTPPAHLQ LLETRSRVPG
     STAALLEPTP DASGVIADSP GHWDTEVPTP ELLGSVESVL HRLQTAFQEA LDLYRMLVSS
     SQLGPEQQQA QTELASTFHW ILNQLEASNC MAAANLAPPQ TLPSPDPLSL PTLCPLASPN
     LQALLEHYSE LLVQAVRRKA RGD
 
 
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