ID   WOX10_ORYSJ             Reviewed;         284 AA.
AC   Q6Z3L4; A0A0P0XDH1; A0AAT5;
DT   23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 123.
DE   RecName: Full=WUSCHEL-related homeobox 10;
DE   AltName: Full=OsWOX10;
DE   AltName: Full=Protein WOX11/12;
GN   Name=WOX10; OrderedLocusNames=Os08g0242400, LOC_Os08g14400;
GN   ORFNames=OsJ_025487, OSJNBa0087F21.36;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [MRNA] OF 39-103.
RX   PubMed=16987950; DOI=10.1093/molbev/msl125;
RA   Nardmann J., Werr W.;
RT   "The shoot stem cell niche in angiosperms: expression patterns of WUS
RT   orthologues in rice and maize imply major modifications in the course of
RT   mono- and dicot evolution.";
RL   Mol. Biol. Evol. 23:2492-2504(2006).
RN   [7]
RP   NOMENCLATURE.
RX   PubMed=17351053; DOI=10.1104/pp.107.095737;
RA   Dai M., Hu Y., Zhao Y., Liu H., Zhou D.-X.;
RT   "A WUSCHEL-LIKE HOMEOBOX gene represses a YABBY gene expression required
RT   for rice leaf development.";
RL   Plant Physiol. 144:380-390(2007).
CC   -!- FUNCTION: Transcription factor which may be involved in developmental
CC       processes. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00108}.
CC   -!- SIMILARITY: Belongs to the WUS homeobox family. {ECO:0000305}.
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DR   EMBL; AP005249; BAD05582.1; -; Genomic_DNA.
DR   EMBL; AP008214; BAF23255.1; -; Genomic_DNA.
DR   EMBL; AP014964; BAT04504.1; -; Genomic_DNA.
DR   EMBL; CM000145; EAZ42004.1; -; Genomic_DNA.
DR   EMBL; AK107305; -; NOT_ANNOTATED_CDS; mRNA.
DR   EMBL; AM234754; CAJ84146.1; -; mRNA.
DR   RefSeq; XP_015649642.1; XM_015794156.1.
DR   AlphaFoldDB; Q6Z3L4; -.
DR   SMR; Q6Z3L4; -.
DR   STRING; 4530.OS08T0242400-01; -.
DR   PaxDb; Q6Z3L4; -.
DR   PRIDE; Q6Z3L4; -.
DR   EnsemblPlants; Os08t0242400-01; Os08t0242400-01; Os08g0242400.
DR   GeneID; 4345042; -.
DR   Gramene; Os08t0242400-01; Os08t0242400-01; Os08g0242400.
DR   KEGG; osa:4345042; -.
DR   eggNOG; ENOG502QUIQ; Eukaryota.
DR   HOGENOM; CLU_030463_0_0_1; -.
DR   InParanoid; Q6Z3L4; -.
DR   OMA; NTAPRFL; -.
DR   OrthoDB; 1267244at2759; -.
DR   Proteomes; UP000000763; Chromosome 8.
DR   Proteomes; UP000007752; Chromosome 8.
DR   Proteomes; UP000059680; Chromosome 8.
DR   Genevisible; Q6Z3L4; OS.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0048830; P:adventitious root development; IEA:InterPro.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR044558; WOX11-like.
DR   PANTHER; PTHR46998; PTHR46998; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   2: Evidence at transcript level;
KW   Developmental protein; DNA-binding; Homeobox; Nucleus; Reference proteome;
KW   Transcription; Transcription regulation.
FT   CHAIN           1..284
FT                   /note="WUSCHEL-related homeobox 10"
FT                   /id="PRO_0000308647"
FT   DNA_BIND        39..103
FT                   /note="Homeobox; WUS-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00108"
FT   REGION          1..43
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        11..28
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   CONFLICT        64
FT                   /note="N -> S (in Ref. 5; AK107305 and 6; CAJ84146)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   284 AA;  30272 MW;  4C6F55691B6979E9 CRC64;
     MDRTATASWE VMSRRGEQQQ QLMMQAPASH NGGSGGGEPA RSRWAPKPEQ ILILESIFNS
     GMVNPAKDET ARIRRLLERF GAVRDANVFY WFQNRRSRSR RRARQLQQAC GAALHQLPSA
     AAAAGAGGGG DYYHHHHQPS SSPFLMHGGG GGGVVTSTTA APAVAASGHF LADEVDGGGD
     DDLFAISRQM GLMARHGGGD HHYSSYADSD ATQLSYQPTG TIQVFINGVA YDVPSGGALD
     MAGTFGRDAM LVHSSGEVLP VDEHGVLINS LQMGECYYLV SKSI