WPP3_ARATH
ID WPP3_ARATH Reviewed; 157 AA.
AC Q0WQ91; Q8LDR1;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 70.
DE RecName: Full=WPP domain-containing protein 3;
DE AltName: Full=MFP1 attachment factor 3;
GN Name=WPP3; Synonyms=MAF3; OrderedLocusNames=At5g27940; ORFNames=F15F15.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista-Mercan V.R., Kim C.J., Chen H., Quan R., De Los Reyes C.,
RA Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP TISSUE SPECIFICITY.
RX PubMed=15548735; DOI=10.1105/tpc.104.026740;
RA Patel S., Rose A., Meulia T., Dixit R., Cyr R.J., Meier I.;
RT "Arabidopsis WPP-domain proteins are developmentally associated with the
RT nuclear envelope and promote cell division.";
RL Plant Cell 16:3260-3273(2004).
CC -!- FUNCTION: Regulates the mitotic activity in roots. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm. Nucleus.
CC -!- TISSUE SPECIFICITY: Expressed in roots, stems and leaves.
CC {ECO:0000269|PubMed:15548735}.
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DR EMBL; AC007399; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; AED93747.1; -; Genomic_DNA.
DR EMBL; BT030603; ABR46183.1; -; mRNA.
DR EMBL; AK228812; BAF00708.1; -; mRNA.
DR EMBL; AY085851; AAM63064.1; -; mRNA.
DR RefSeq; NP_568504.1; NM_122676.2.
DR AlphaFoldDB; Q0WQ91; -.
DR SMR; Q0WQ91; -.
DR IntAct; Q0WQ91; 1.
DR STRING; 3702.AT5G27940.1; -.
DR PaxDb; Q0WQ91; -.
DR PRIDE; Q0WQ91; -.
DR EnsemblPlants; AT5G27940.1; AT5G27940.1; AT5G27940.
DR GeneID; 832861; -.
DR Gramene; AT5G27940.1; AT5G27940.1; AT5G27940.
DR KEGG; ath:AT5G27940; -.
DR Araport; AT5G27940; -.
DR TAIR; locus:2143749; AT5G27940.
DR eggNOG; KOG0305; Eukaryota.
DR HOGENOM; CLU_101563_1_0_1; -.
DR InParanoid; Q0WQ91; -.
DR OMA; LFSVWPP; -.
DR OrthoDB; 1595866at2759; -.
DR PhylomeDB; Q0WQ91; -.
DR PRO; PR:Q0WQ91; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q0WQ91; baseline and differential.
DR Genevisible; Q0WQ91; AT.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0048527; P:lateral root development; IEA:InterPro.
DR GO; GO:0000278; P:mitotic cell cycle; IEA:InterPro.
DR Gene3D; 1.10.246.200; -; 1.
DR InterPro; IPR044692; WPP1/2/3.
DR InterPro; IPR025265; WPP_dom.
DR InterPro; IPR038214; WPP_sf.
DR PANTHER; PTHR34362; PTHR34362; 1.
DR Pfam; PF13943; WPP; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Nucleus; Reference proteome.
FT CHAIN 1..157
FT /note="WPP domain-containing protein 3"
FT /id="PRO_0000347193"
FT REGION 1..41
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 37..138
FT /note="WPP; degenerate"
FT COMPBIAS 1..24
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 25..41
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 94
FT /note="A -> S (in Ref. 4; AAM63064)"
FT /evidence="ECO:0000305"
FT CONFLICT 149
FT /note="T -> P (in Ref. 4; AAM63064)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 157 AA; 17455 MW; B9ABF94899B92342 CRC64;
MAETADTINT TVSTPQPQLE SRSDETSCLQ KHRSDATSEV TKEEKSGGIL FSVWPPCQKS
RDYVVNSMIK TLSTDSILSY KYGTIKPEEA SAVAKSIEEK AYDIASRFVS SDGIKNLEVY
GIETSERMIE SAEVRFKANG SMELLLNQTI KMMQLLI
