WRK12_ARATH
ID WRK12_ARATH Reviewed; 218 AA.
AC Q93WY4; Q8S8S5;
DT 11-APR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 118.
DE RecName: Full=Probable WRKY transcription factor 12;
DE AltName: Full=WRKY DNA-binding protein 12;
GN Name=WRKY12; OrderedLocusNames=At2g44745; ORFNames=F16B22.46;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia; TISSUE=Flower;
RA Ulker B., Kushnir S., Somssich I.E.;
RL Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 9-218.
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcription factor. Interacts specifically with the W box
CC (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-
CC acting element (By similarity). {ECO:0000250}.
CC -!- INTERACTION:
CC Q93WY4; Q17TI5: BRX; NbExp=3; IntAct=EBI-25513081, EBI-4426649;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the WRKY group II-c family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAM14881.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=AAM65705.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AF404857; AAK96195.1; -; mRNA.
DR EMBL; AC003672; AAM14881.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002685; AEC10462.1; -; Genomic_DNA.
DR EMBL; AY088161; AAM65705.1; ALT_INIT; mRNA.
DR RefSeq; NP_566025.2; NM_130039.3.
DR AlphaFoldDB; Q93WY4; -.
DR SMR; Q93WY4; -.
DR BioGRID; 4419; 2.
DR IntAct; Q93WY4; 1.
DR STRING; 3702.AT2G44745.1; -.
DR PaxDb; Q93WY4; -.
DR PRIDE; Q93WY4; -.
DR ProteomicsDB; 234422; -.
DR EnsemblPlants; AT2G44745.1; AT2G44745.1; AT2G44745.
DR GeneID; 819083; -.
DR Gramene; AT2G44745.1; AT2G44745.1; AT2G44745.
DR KEGG; ath:AT2G44745; -.
DR Araport; AT2G44745; -.
DR TAIR; locus:505006317; AT2G44745.
DR eggNOG; ENOG502QTRJ; Eukaryota.
DR HOGENOM; CLU_073202_0_2_1; -.
DR InParanoid; Q93WY4; -.
DR OMA; AHSNSWW; -.
DR OrthoDB; 1285004at2759; -.
DR PhylomeDB; Q93WY4; -.
DR PRO; PR:Q93WY4; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q93WY4; baseline and differential.
DR Genevisible; Q93WY4; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0009832; P:plant-type cell wall biogenesis; IMP:TAIR.
DR Gene3D; 2.20.25.80; -; 1.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31221; PTHR31221; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; SSF118290; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..218
FT /note="Probable WRKY transcription factor 12"
FT /id="PRO_0000133654"
FT DNA_BIND 139..204
FT /note="WRKY"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT REGION 49..120
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 199..218
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 49..82
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 92..118
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 218 AA; 24548 MW; E44216779B0C8299 CRC64;
MEGGGRRVFS NYDLQQVTSS STTIQENMNF LVPFEETNVL TFFSSSSSSS LSSPSFPIHN
SSSTTTTHAP LGFSNNLQGG GPLGSKVVND DQENFGGGTN NDAHSNSWWR SNSGSGDMKN
KVKIRRKLRE PRFCFQTKSD VDVLDDGYKW RKYGQKVVKN SLHPRSYYRC THNNCRVKKR
VERLSEDCRM VITTYEGRHN HIPSDDSTSP DHDCLSSF
