WRK19_ORYSJ
ID WRK19_ORYSJ Reviewed; 277 AA.
AC Q0DFT7; A0A0P0WQV1; Q65XL4; Q6IER2;
DT 10-FEB-2021, integrated into UniProtKB/Swiss-Prot.
DT 17-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 118.
DE RecName: Full=Transcription factor WRKY19 {ECO:0000305};
DE Short=OsWRKY19 {ECO:0000303|PubMed:15047897};
DE AltName: Full=WRKY transcription factor 19 {ECO:0000305};
GN Name=WRKY19 {ECO:0000303|PubMed:15047897};
GN OrderedLocusNames=Os05g0571200 {ECO:0000312|EMBL:BAS95427.1},
GN LOC_Os05g49620 {ECO:0000305};
GN ORFNames=OJ1735_C10.4 {ECO:0000312|EMBL:AAU44093.1},
GN OsJ_19612 {ECO:0000312|EMBL:EEE64756.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=15047897; DOI=10.1104/pp.103.034967;
RA Zhang Z.-L., Xie Z., Zou X., Casaretto J., Ho T.-H.D., Shen Q.J.;
RT "A rice WRKY gene encodes a transcriptional repressor of the gibberellin
RT signaling pathway in aleurone cells.";
RL Plant Physiol. 134:1500-1513(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=18987217; DOI=10.1104/pp.108.128579;
RA Yilmaz A., Nishiyama M.Y., Fuentes B.G., Souza G.M., Janies D., Gray J.,
RA Grotewold E.;
RT "GRASSIUS: a platform for comparative regulatory genomics across the
RT grasses.";
RL Plant Physiol. 149:171-180(2009).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [6]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [8]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [9]
RP INDUCTION BY BTH.
RX PubMed=17601827; DOI=10.1105/tpc.106.046250;
RA Shimono M., Sugano S., Nakayama A., Jiang C.-J., Ono K., Toki S.,
RA Takatsuji H.;
RT "Rice WRKY45 plays a crucial role in benzothiadiazole-inducible blast
RT resistance.";
RL Plant Cell 19:2064-2076(2007).
RN [10]
RP FUNCTION, AND INDUCTION.
RX PubMed=22437844; DOI=10.1093/pcp/pcs033;
RA Kim S.H., Oikawa T., Kyozuka J., Wong H.L., Umemura K., Kishi-Kaboshi M.,
RA Takahashi A., Kawano Y., Kawasaki T., Shimamoto K.;
RT "The bHLH Rac Immunity1 (RAI1) is activated by OsRac1 via OsMAPK3 and
RT OsMAPK6 in rice immunity.";
RL Plant Cell Physiol. 53:740-754(2012).
CC -!- FUNCTION: May play a role in defense responses.
CC {ECO:0000305|PubMed:22437844}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00223}.
CC -!- INDUCTION: Induced by benzothiadiazole (BTH) (PubMed:17601827). Induced
CC by sphingolipid elicitor and chitin elicitor, and a compatible race of
CC the rice blast fungus Magnaporthe oryzae (PubMed:22437844).
CC {ECO:0000269|PubMed:17601827, ECO:0000269|PubMed:22437844}.
CC -!- SIMILARITY: Belongs to the WRKY group III family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=DAA05084.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; BK005022; DAA05084.1; ALT_SEQ; Genomic_DNA.
DR EMBL; HQ858860; ADX60272.1; -; mRNA.
DR EMBL; AC104284; AAU44093.1; -; Genomic_DNA.
DR EMBL; AP008211; BAF18286.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS95427.1; -; Genomic_DNA.
DR EMBL; CM000142; EEE64756.1; -; Genomic_DNA.
DR EMBL; AK108389; BAG98392.1; -; mRNA.
DR RefSeq; XP_015638413.1; XM_015782927.1.
DR AlphaFoldDB; Q0DFT7; -.
DR SMR; Q0DFT7; -.
DR STRING; 4530.OS05T0571200-01; -.
DR PaxDb; Q0DFT7; -.
DR PRIDE; Q0DFT7; -.
DR EnsemblPlants; Os05t0571200-01; Os05t0571200-01; Os05g0571200.
DR GeneID; 4339665; -.
DR Gramene; Os05t0571200-01; Os05t0571200-01; Os05g0571200.
DR KEGG; osa:4339665; -.
DR eggNOG; ENOG502R5K9; Eukaryota.
DR HOGENOM; CLU_058534_1_0_1; -.
DR InParanoid; Q0DFT7; -.
DR OMA; DMDHEAR; -.
DR OrthoDB; 1331082at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000007752; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR Gene3D; 2.20.25.80; -; 1.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR32096; PTHR32096; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; SSF118290; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Plant defense; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..277
FT /note="Transcription factor WRKY19"
FT /id="PRO_0000452039"
FT DNA_BIND 100..168
FT /note="WRKY"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT CONFLICT 85
FT /note="K -> Q (in Ref. 3; AAU44093)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 277 AA; 29872 MW; 28853F77CF0F1440 CRC64;
MVELCGGEGE GQIMLATELA QLRAMARELE AKMDPDRVAA RELCRALASS VDRSIRLAAS
CFPPPEHPPP AAGNAGRDAA FKKRKGMAKV RRQVRVTSVQ DTASLDDGLS WRKYGQKDIL
GAKYPRAYFR CTHRHTQGCN ATKQVQRADG DPLLFDVVYL GDHTCGQAAV AAAAQSAPPE
HAGQEQQRQS SLLAAGTEGI HQQVVAEPMA APFLFTSTAA GGVDDGYFSF ISPANSDCQF
SSDFSAGSVG VDMDHEARFE DLFSSTLEFF QSEIQNL
