WRK24_ARATH
ID WRK24_ARATH Reviewed; 179 AA.
AC Q9FFS3;
DT 11-APR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=Probable WRKY transcription factor 24;
DE AltName: Full=WRKY DNA-binding protein 24;
GN Name=WRKY24; OrderedLocusNames=At5g41570; ORFNames=MBK23.9;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia; TISSUE=Flower;
RA Ulker B., Kushnir S., Somssich I.E.;
RL Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9330910; DOI=10.1093/dnares/4.3.215;
RA Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence
RT features of the 1.6 Mb regions covered by twenty physically assigned P1
RT clones.";
RL DNA Res. 4:215-230(1997).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- FUNCTION: Transcription factor. Interacts specifically with the W box
CC (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-
CC acting element (By similarity). {ECO:0000250}.
CC -!- INTERACTION:
CC Q9FFS3; Q84JF0: APK4; NbExp=3; IntAct=EBI-4431481, EBI-25520113;
CC Q9FFS3; A0A178VL61: AXX17_At2g18500; NbExp=3; IntAct=EBI-4431481, EBI-25517681;
CC Q9FFS3; Q9FNP0: VQ31; NbExp=3; IntAct=EBI-4431481, EBI-25517821;
CC Q9FFS3; Q9CA36: VQ8; NbExp=4; IntAct=EBI-4431481, EBI-4451970;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the WRKY group II-c family. {ECO:0000305}.
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DR EMBL; AF404864; AAK96202.1; -; mRNA.
DR EMBL; AB005233; BAB11463.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94693.1; -; Genomic_DNA.
DR EMBL; BT004595; AAO42841.1; -; mRNA.
DR RefSeq; NP_198972.1; NM_123521.4.
DR AlphaFoldDB; Q9FFS3; -.
DR SMR; Q9FFS3; -.
DR BioGRID; 19410; 4.
DR IntAct; Q9FFS3; 5.
DR STRING; 3702.AT5G41570.1; -.
DR PaxDb; Q9FFS3; -.
DR PRIDE; Q9FFS3; -.
DR EnsemblPlants; AT5G41570.1; AT5G41570.1; AT5G41570.
DR GeneID; 834159; -.
DR Gramene; AT5G41570.1; AT5G41570.1; AT5G41570.
DR KEGG; ath:AT5G41570; -.
DR Araport; AT5G41570; -.
DR TAIR; locus:2160512; AT5G41570.
DR eggNOG; ENOG502RXZS; Eukaryota.
DR HOGENOM; CLU_073202_4_0_1; -.
DR InParanoid; Q9FFS3; -.
DR OMA; HTHHIEK; -.
DR OrthoDB; 1289791at2759; -.
DR PhylomeDB; Q9FFS3; -.
DR PRO; PR:Q9FFS3; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FFS3; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 2.20.25.80; -; 1.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31221; PTHR31221; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; SSF118290; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..179
FT /note="Probable WRKY transcription factor 24"
FT /id="PRO_0000133666"
FT DNA_BIND 92..157
FT /note="WRKY"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
SQ SEQUENCE 179 AA; 20812 MW; 0E76D9E15AEE27CE CRC64;
MDREDINPML SRLDVENNNT FSSFVDKTLM MMPPSTFSGE VEPSSSSSWY PESFHVHAPP
LPPENDQIGE KGKELKEKRS RKVPRIAFHT RSDDDVLDDG YRWRKYGQKS VKHNAHPRSY
YRCTYHTCNV KKQVQRLAKD PNVVVTTYEG VHNHPCEKLM ETLNPLLRQL QFLSSFSNL
