WRK28_ORYSI
ID WRK28_ORYSI Reviewed; 403 AA.
AC B8B0R8;
DT 07-SEP-2016, integrated into UniProtKB/Swiss-Prot.
DT 07-SEP-2016, sequence version 2.
DT 25-MAY-2022, entry version 66.
DE RecName: Full=WRKY transcription factor WRKY28 {ECO:0000305};
DE Short=OsWRKY28 {ECO:0000305};
GN Name=WRKY28 {ECO:0000305};
GN ORFNames=OsI_23911 {ECO:0000312|EMBL:EEC81085.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- FUNCTION: Transcription repressor. Interacts specifically with the W
CC box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive
CC cis-acting element. Regulates, probably indirectly, the activation of
CC defense-related genes during defense response. Modulates plant innate
CC immunity against X.oryzae pv. oryzae (Xoo). Regulates negatively the
CC basal defense responses to the compatible fungus M.oryzae.
CC {ECO:0000250|UniProtKB:Q6QHD1}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q6QHD1,
CC ECO:0000255|PROSITE-ProRule:PRU00223}.
CC -!- INDUCTION: Induced by biotic elicitors (e.g. fungal chitin
CC oligosaccharide). Accumulates in response to M.oryzae.
CC {ECO:0000250|UniProtKB:Q0DAJ3}.
CC -!- DOMAIN: The WRKY domain is required to bind DNA.
CC {ECO:0000250|UniProtKB:Q6QHD1}.
CC -!- SIMILARITY: Belongs to the WRKY group II-a family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=EEC81085.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; CM000131; EEC81085.1; ALT_INIT; Genomic_DNA.
DR AlphaFoldDB; B8B0R8; -.
DR SMR; B8B0R8; -.
DR STRING; 39946.B8B0R8; -.
DR HOGENOM; CLU_047067_0_0_1; -.
DR Proteomes; UP000007015; Chromosome 6.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR GO; GO:0045892; P:negative regulation of transcription, DNA-templated; ISS:UniProtKB.
DR GO; GO:1905034; P:regulation of antifungal innate immune response; ISS:UniProtKB.
DR GO; GO:0010200; P:response to chitin; ISS:UniProtKB.
DR GO; GO:0009620; P:response to fungus; ISS:UniProtKB.
DR Gene3D; 2.20.25.80; -; 1.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31429; PTHR31429; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; SSF118290; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 3: Inferred from homology;
KW Coiled coil; DNA-binding; Nucleus; Plant defense; Reference proteome;
KW Repressor; Transcription; Transcription regulation.
FT CHAIN 1..403
FT /note="WRKY transcription factor WRKY28"
FT /id="PRO_0000436953"
FT DNA_BIND 245..311
FT /note="WRKY"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT REGION 157..178
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 306..335
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 101..135
FT /evidence="ECO:0000255"
FT MOTIF 222..229
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00768"
FT COMPBIAS 157..176
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 403 AA; 43508 MW; 032C4D41D0A1BCAE CRC64;
MAKMLPPPSQ SVPSRPPSWL YIPPRRRHGT FTSSCAFRLS PSSPSSPPPP VLDFQYIQFM
DSWIEQTSLS LDLNVGLPST ARRSSAPAAP IKVLVEENFL SFKKDHEVEA LEAELRRASE
ENKKLTEMLR AVVAKYPELQ GQVNDMMSAA AAAAVNAGNH QSSTSEGGSV SPSRKRIRSV
DSLDDAAHHR KPSPPFVAAA AAAAYASPDQ MECTSAAAAA AAKRVVREDC KPKVSKRFVH
ADPSDLSLVV KDGYQWRKYG QKVTKDNPCP RAYFRCSFAP ACPVKKKVQR SADDNTVLVA
TYEGEHNHAQ PPHHDAGSKT AAAAKHSQHQ PPPSAAAAVV RQQQEQAAAA GPSTEVAARK
NLAEQMAATL TRDPGFKAAL VTALSGRILE LSPTRTDPSL ERR
