WRK30_ARATH
ID WRK30_ARATH Reviewed; 303 AA.
AC Q9FL62;
DT 11-APR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 127.
DE RecName: Full=Probable WRKY transcription factor 30 {ECO:0000303|PubMed:22268143};
DE AltName: Full=WRKY DNA-binding protein 30 {ECO:0000303|PubMed:22268143};
GN Name=WRKY30 {ECO:0000303|PubMed:22268143};
GN OrderedLocusNames=At5g24110 {ECO:0000312|Araport:AT5G24110};
GN ORFNames=MLE8.3 {ECO:0000312|EMBL:BAB11571.1}, MZF18.18 {ECO:0000305};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia; TISSUE=Flower;
RA Ulker B., Kushnir S., Somssich I.E.;
RL Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9679202; DOI=10.1093/dnares/5.2.131;
RA Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence
RT features of the regions of 1,381,565 bp covered by twenty one physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:131-145(1998).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [7]
RP FUNCTION, INTERACTION WITH WRKY53; WRKY54 AND WRKY70, DEVELOPMENTAL STAGE,
RP AND INDUCTION BY SALICYLIC ACID.
RC STRAIN=cv. Columbia;
RX PubMed=22268143; DOI=10.1093/jxb/err450;
RA Besseau S., Li J., Palva E.T.;
RT "WRKY54 and WRKY70 co-operate as negative regulators of leaf senescence in
RT Arabidopsis thaliana.";
RL J. Exp. Bot. 63:2667-2679(2012).
CC -!- FUNCTION: Transcription factor. Interacts specifically with the W box
CC (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-
CC acting element. {ECO:0000250|UniProtKB:Q9SUP6}.
CC -!- SUBUNIT: Interacts with WRKY53, WRKY54 and WRKY70.
CC {ECO:0000269|PubMed:22268143}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00223}.
CC -!- DEVELOPMENTAL STAGE: Accumulates during developmental leaf senescence.
CC {ECO:0000269|PubMed:22268143}.
CC -!- INDUCTION: By salicylic acid (SA). {ECO:0000269|PubMed:22268143}.
CC -!- SIMILARITY: Belongs to the WRKY group III family. {ECO:0000305}.
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DR EMBL; AF404858; AAK96196.1; -; mRNA.
DR EMBL; AB010696; BAB11571.1; -; Genomic_DNA.
DR EMBL; CP002688; AED93258.1; -; Genomic_DNA.
DR EMBL; AK117885; BAC42524.1; -; mRNA.
DR EMBL; BT005295; AAO63359.1; -; mRNA.
DR EMBL; AY088401; AAM65939.1; -; mRNA.
DR RefSeq; NP_568439.1; NM_122316.3.
DR AlphaFoldDB; Q9FL62; -.
DR SMR; Q9FL62; -.
DR BioGRID; 17751; 4.
DR STRING; 3702.AT5G24110.1; -.
DR PaxDb; Q9FL62; -.
DR PRIDE; Q9FL62; -.
DR ProteomicsDB; 234270; -.
DR EnsemblPlants; AT5G24110.1; AT5G24110.1; AT5G24110.
DR GeneID; 832476; -.
DR Gramene; AT5G24110.1; AT5G24110.1; AT5G24110.
DR KEGG; ath:AT5G24110; -.
DR Araport; AT5G24110; -.
DR TAIR; locus:2167428; AT5G24110.
DR eggNOG; ENOG502QPRM; Eukaryota.
DR HOGENOM; CLU_058534_0_0_1; -.
DR InParanoid; Q9FL62; -.
DR OMA; RDYAHQF; -.
DR OrthoDB; 1331082at2759; -.
DR PhylomeDB; Q9FL62; -.
DR PRO; PR:Q9FL62; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FL62; baseline and differential.
DR Genevisible; Q9FL62; AT.
DR GO; GO:0005737; C:cytoplasm; IDA:TAIR.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR GO; GO:0010150; P:leaf senescence; IEP:UniProtKB.
DR GO; GO:0042542; P:response to hydrogen peroxide; IEP:TAIR.
DR GO; GO:0010193; P:response to ozone; IEP:TAIR.
DR GO; GO:0009751; P:response to salicylic acid; IEP:TAIR.
DR Gene3D; 2.20.25.80; -; 1.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR32096; PTHR32096; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; SSF118290; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..303
FT /note="Probable WRKY transcription factor 30"
FT /id="PRO_0000133672"
FT DNA_BIND 107..175
FT /note="WRKY"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT REGION 65..92
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 266..291
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 266..285
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 303 AA; 33985 MW; B28C2DE8D6E20D78 CRC64;
MEKNHSSGEW EKMKNEINEL MIEGRDYAHQ FGSASSQETR EHLAKKILQS YHKSLTIMNY
SGELDQVSQG GGSPKSDDSD QEPLVIKSSK KSMPRWSSKV RIAPGAGVDR TLDDGFSWRK
YGQKDILGAK FPRGYYRCTY RKSQGCEATK QVQRSDENQM LLEISYRGIH SCSQAANVGT
TMPIQNLEPN QTQEHGNLDM VKESVDNYNH QAHLHHNLHY PLSSTPNLEN NNAYMLQMRD
QNIEYFGSTS FSSDLGTSIN YNFPASGSAS HSASNSPSTV PLESPFESYD PNHPYGGFGG
FYS
