WRK49_ARATH
ID WRK49_ARATH Reviewed; 274 AA.
AC Q9FHR7;
DT 11-APR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Probable WRKY transcription factor 49;
DE AltName: Full=WRKY DNA-binding protein 49;
GN Name=WRKY49; OrderedLocusNames=At5g43290; ORFNames=MNL12.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10470850; DOI=10.1093/dnares/6.3.183;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Kotani H.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IX. Sequence
RT features of the regions of 1,011,550 bp covered by seventeen P1 and TAC
RT clones.";
RL DNA Res. 6:183-195(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- FUNCTION: Transcription factor. Interacts specifically with the W box
CC (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-
CC acting element (By similarity). {ECO:0000250}.
CC -!- INTERACTION:
CC Q9FHR7; Q9LQF0: TCP23; NbExp=3; IntAct=EBI-15196471, EBI-15192297;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the WRKY group II-c family. {ECO:0000305}.
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DR EMBL; AB017070; BAB10592.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94939.1; -; Genomic_DNA.
DR EMBL; BT010424; AAQ62425.1; -; mRNA.
DR RefSeq; NP_199143.1; NM_123695.3.
DR AlphaFoldDB; Q9FHR7; -.
DR SMR; Q9FHR7; -.
DR BioGRID; 19597; 4.
DR IntAct; Q9FHR7; 4.
DR STRING; 3702.AT5G43290.1; -.
DR PaxDb; Q9FHR7; -.
DR PRIDE; Q9FHR7; -.
DR EnsemblPlants; AT5G43290.1; AT5G43290.1; AT5G43290.
DR GeneID; 834347; -.
DR Gramene; AT5G43290.1; AT5G43290.1; AT5G43290.
DR KEGG; ath:AT5G43290; -.
DR Araport; AT5G43290; -.
DR TAIR; locus:2169268; AT5G43290.
DR eggNOG; ENOG502R1XV; Eukaryota.
DR HOGENOM; CLU_057956_0_0_1; -.
DR InParanoid; Q9FHR7; -.
DR OrthoDB; 1071458at2759; -.
DR PhylomeDB; Q9FHR7; -.
DR PRO; PR:Q9FHR7; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FHR7; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR Gene3D; 2.20.25.80; -; 1.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31221; PTHR31221; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; SSF118290; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 1: Evidence at protein level;
KW Coiled coil; DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..274
FT /note="Probable WRKY transcription factor 49"
FT /id="PRO_0000133690"
FT DNA_BIND 108..173
FT /note="WRKY"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT REGION 188..228
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 193..222
FT /evidence="ECO:0000255"
FT COMPBIAS 191..209
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 210..228
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 274 AA; 31581 MW; AB17D831E64AF55C CRC64;
MEEEGYQWAR RCGNNAVEDP FVYEPPLFFL PQDQHHMHGL MPNEDFIANK FVTSTLYSGP
RIQDIANALA LVEPLTHPVR EISKSTVPLL ERSTLSKVDR YTLKVKNNSN GMCDDGYKWR
KYGQKSIKNS PNPRSYYKCT NPICNAKKQV ERSIDESNTY IITYEGFHFH YTYPFFLPDK
TRQWPNKKTK IHKHNAQDMN KKSQTQEESK EAQLGELTNQ NHPVNKAQEN TPANLEEGLF
FPVDQCRPQQ GLLEDVVAPA MKNIPTRDSV LTAS
