WRK51_ORYSJ
ID WRK51_ORYSJ Reviewed; 326 AA.
AC Q0JEE2; B9FE97; Q7XVV4;
DT 07-SEP-2016, integrated into UniProtKB/Swiss-Prot.
DT 03-OCT-2006, sequence version 1.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=WRKY transcription factor WRKY51 {ECO:0000303|PubMed:15618416};
DE Short=OsWRKY51 {ECO:0000303|PubMed:15618416};
GN Name=WRKY51 {ECO:0000303|PubMed:15618416};
GN OrderedLocusNames=Os04g0287400 {ECO:0000312|EMBL:BAF14295.1};
GN ORFNames=OsJ_14148 {ECO:0000312|EMBL:EEE60680.1},
GN OSJNBa0065J03.18 {ECO:0000312|EMBL:CAD40422.3},
GN OSNPB_040287400 {ECO:0000312|EMBL:BAS88402.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=18987217; DOI=10.1104/pp.108.128579;
RA Yilmaz A., Nishiyama M.Y., Fuentes B.G., Souza G.M., Janies D., Gray J.,
RA Grotewold E.;
RT "GRASSIUS: a platform for comparative regulatory genomics across the
RT grasses.";
RL Plant Physiol. 149:171-180(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [8]
RP GENE FAMILY.
RX PubMed=15629062; DOI=10.1186/1471-2148-5-1;
RA Zhang Y., Wang L.;
RT "The WRKY transcription factor superfamily: its origin in eukaryotes and
RT expansion in plants.";
RL BMC Evol. Biol. 5:1-1(2005).
RN [9]
RP GENE FAMILY.
RX PubMed=16106749; DOI=10.1093/dnares/12.1.9;
RA Wu K.-L., Guo Z.-J., Wang H.-H., Li J.;
RT "The WRKY family of transcription factors in rice and Arabidopsis and their
RT origins.";
RL DNA Res. 12:9-26(2005).
RN [10]
RP INDUCTION BY ABSCISIC ACID, REPRESSION BY GIBBERELLIC ACID, GENE FAMILY,
RP AND NOMENCLATURE.
RX PubMed=15618416; DOI=10.1104/pp.104.054312;
RA Xie Z., Zhang Z.-L., Zou X., Huang J., Ruas P., Thompson D., Shen Q.J.;
RT "Annotations and functional analyses of the rice WRKY gene superfamily
RT reveal positive and negative regulators of abscisic acid signaling in
RT aleurone cells.";
RL Plant Physiol. 137:176-189(2005).
RN [11]
RP FUNCTION, INTERACTION WITH WRKY71, TISSUE SPECIFICITY, INDUCTION BY
RP ABSCISIC ACID AND UNICONAZOLE, AND SUBCELLULAR LOCATION.
RX PubMed=16623886; DOI=10.1111/j.1365-313x.2006.02694.x;
RA Xie Z., Zhang Z.L., Zou X., Yang G., Komatsu S., Shen Q.J.;
RT "Interactions of two abscisic-acid induced WRKY genes in repressing
RT gibberellin signaling in aleurone cells.";
RL Plant J. 46:231-242(2006).
CC -!- FUNCTION: Transcription factor. Interacts, when in complex with WRKY71,
CC specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring
CC elicitor-responsive cis-acting element. Represses specifically
CC gibberellic acid (GA)-induced promoters in aleurone cells, probably by
CC interfering with GAM1. {ECO:0000269|PubMed:16623886}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00223,
CC ECO:0000269|PubMed:16623886}. Note=Localized in nuclei of aleurone
CC cells. {ECO:0000269|PubMed:16623886}.
CC -!- TISSUE SPECIFICITY: Highly expressed in aleurone cells. In seeds,
CC predominantly present in the plumule, radicle and scutellum of the
CC embryo. {ECO:0000269|PubMed:16623886}.
CC -!- INDUCTION: Induced by abscisic acid (ABA) in aleurone cells
CC (PubMed:15618416, PubMed:16623886). Accumulates in response to
CC uniconazole, a gibberellic acid (GA) biosynthesis inhibitor
CC (PubMed:16623886). Repressed by GA (PubMed:15618416).
CC {ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:16623886}.
CC -!- DOMAIN: The WRKY domain is required to bind DNA.
CC {ECO:0000250|UniProtKB:Q6QHD1}.
CC -!- SIMILARITY: Belongs to the WRKY group II-a family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAD40422.3; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; HQ858832; ADX60244.1; -; mRNA.
DR EMBL; AL731615; CAD40422.3; ALT_INIT; Genomic_DNA.
DR EMBL; AP008210; BAF14295.1; -; Genomic_DNA.
DR EMBL; AP014960; BAS88402.1; -; Genomic_DNA.
DR EMBL; CM000141; EEE60680.1; -; Genomic_DNA.
DR EMBL; AK100954; BAG94849.1; -; mRNA.
DR RefSeq; XP_015633572.1; XM_015778086.1.
DR AlphaFoldDB; Q0JEE2; -.
DR SMR; Q0JEE2; -.
DR STRING; 4530.OS04T0287400-01; -.
DR PaxDb; Q0JEE2; -.
DR PRIDE; Q0JEE2; -.
DR EnsemblPlants; Os04t0287400-01; Os04t0287400-01; Os04g0287400.
DR GeneID; 4335388; -.
DR Gramene; Os04t0287400-01; Os04t0287400-01; Os04g0287400.
DR KEGG; osa:4335388; -.
DR eggNOG; ENOG502QR3I; Eukaryota.
DR HOGENOM; CLU_040478_1_0_1; -.
DR InParanoid; Q0JEE2; -.
DR OMA; HRHAPEN; -.
DR OrthoDB; 1111662at2759; -.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000007752; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1990841; F:promoter-specific chromatin binding; IDA:UniProtKB.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0009938; P:negative regulation of gibberellic acid mediated signaling pathway; IMP:UniProtKB.
DR GO; GO:0009737; P:response to abscisic acid; IDA:UniProtKB.
DR GO; GO:0009739; P:response to gibberellin; IDA:UniProtKB.
DR Gene3D; 2.20.25.80; -; 1.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR InterPro; IPR018872; Zn-cluster-dom.
DR PANTHER; PTHR31282; PTHR31282; 1.
DR Pfam; PF10533; Plant_zn_clust; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; SSF118290; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..326
FT /note="WRKY transcription factor WRKY51"
FT /id="PRO_0000436954"
FT DNA_BIND 241..307
FT /note="WRKY"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT REGION 87..113
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 204..225
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 297..326
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 70..77
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00768"
FT COMPBIAS 311..326
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 82
FT /note="H -> N (in Ref. 6; EEE60680)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 326 AA; 34305 MW; F797C3BC5218200C CRC64;
MITMDLMGGY GRVDEQVAIQ EAAAAGLRGM EHLILQLSQT GTSERSPAPA QEQQQQVDCR
EITDMTVSKF KKVISMLNRT GHARFRRGPV VAQSSGPAAS EPAPVRSSPS AVSRPMTLDF
TKAASGYGKD AGFSVSGISA ASSSFLSSVT GDGSVSNGRG GGSSSLMLPP PPATSCGKPP
LSSAAAAMSA GAGHKRKCHD HAHSENVAGG KYGSTGGRCH CSKRRKHRVK RTIRVPAISS
KVADIPADDF SWRKYGQKPI KGSPFPRGYY KCSTLRGCPA RKHVERDPTD PSMLIVTYEG
EHRHSPSAAG QDHPPAPPPP LALPLA
