ID   WRK55_ARATH             Reviewed;         292 AA.
AC   Q9SHB5; Q7G9H9;
DT   11-APR-2003, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-2000, sequence version 1.
DT   03-AUG-2022, entry version 126.
DE   RecName: Full=WRKY transcription factor 55;
DE   AltName: Full=WRKY DNA-binding protein 55;
GN   Name=WRKY55; OrderedLocusNames=At2g40740; ORFNames=T7D17.8;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617197; DOI=10.1038/45471;
RA   Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA   Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA   Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA   Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA   Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA   Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA   Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT   "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL   Nature 402:761-768(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA   Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL   Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Transcription factor. Interacts specifically with the W box
CC       (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-
CC       acting element (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=1;
CC         Comment=A number of isoforms are produced. According to EST
CC         sequences.;
CC       Name=1;
CC         IsoId=Q9SHB5-1; Sequence=Displayed;
CC   -!- SIMILARITY: Belongs to the WRKY group III family. {ECO:0000305}.
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DR   EMBL; CP002685; AEC09870.1; -; Genomic_DNA.
DR   EMBL; DQ056575; AAY78725.1; -; mRNA.
DR   PIR; C84833; C84833.
DR   RefSeq; NP_181606.1; NM_129636.3. [Q9SHB5-1]
DR   AlphaFoldDB; Q9SHB5; -.
DR   SMR; Q9SHB5; -.
DR   BioGRID; 4007; 3.
DR   STRING; 3702.AT2G40740.1; -.
DR   PaxDb; Q9SHB5; -.
DR   PRIDE; Q9SHB5; -.
DR   ProteomicsDB; 234347; -. [Q9SHB5-1]
DR   EnsemblPlants; AT2G40740.1; AT2G40740.1; AT2G40740. [Q9SHB5-1]
DR   GeneID; 818669; -.
DR   Gramene; AT2G40740.1; AT2G40740.1; AT2G40740. [Q9SHB5-1]
DR   KEGG; ath:AT2G40740; -.
DR   Araport; AT2G40740; -.
DR   TAIR; locus:2064816; AT2G40740.
DR   eggNOG; ENOG502RSM6; Eukaryota.
DR   HOGENOM; CLU_052574_0_0_1; -.
DR   InParanoid; Q9SHB5; -.
DR   OMA; MQIEPDL; -.
DR   PhylomeDB; Q9SHB5; -.
DR   PRO; PR:Q9SHB5; -.
DR   Proteomes; UP000006548; Chromosome 2.
DR   ExpressionAtlas; Q9SHB5; baseline and differential.
DR   Genevisible; Q9SHB5; AT.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IDA:TAIR.
DR   GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR   GO; GO:0010468; P:regulation of gene expression; IMP:TAIR.
DR   Gene3D; 2.20.25.80; -; 1.
DR   InterPro; IPR003657; WRKY_dom.
DR   InterPro; IPR036576; WRKY_dom_sf.
DR   InterPro; IPR044810; WRKY_plant.
DR   PANTHER; PTHR31282; PTHR31282; 1.
DR   Pfam; PF03106; WRKY; 1.
DR   SMART; SM00774; WRKY; 1.
DR   SUPFAM; SSF118290; SSF118290; 1.
DR   PROSITE; PS50811; WRKY; 1.
PE   2: Evidence at transcript level;
KW   Alternative splicing; DNA-binding; Nucleus; Reference proteome;
KW   Transcription; Transcription regulation.
FT   CHAIN           1..292
FT                   /note="WRKY transcription factor 55"
FT                   /id="PRO_0000133696"
FT   DNA_BIND        167..235
FT                   /note="WRKY"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT   REGION          133..155
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   292 AA;  32489 MW;  BA27C9105740F36E CRC64;
     MYSYKKISYQ MEEVMSMIFH GMKLVKSLES SLPEKPPESL LTSLDEIVKT FSDANERLKM
     LLEIKNSETA LNKTKPVIVS VANQMLMQME PGLMQEYWLR YGGSTSSQGT EAMFQTQLMA
     VDGGGERNLT AAVERSGASG SSTPRQRRRK DEGEEQTVLV AALRTGNTDL PPDDNHTWRK
     YGQKEILGSR FPRAYYRCTH QKLYNCPAKK QVQRLNDDPF TFRVTYRGSH TCYNSTAPTA
     SSATPSTIPI SSVTTGHSVD YGLAVVDMAD VMFGSGGVGT NMDFIFPKND PS