WRK58_ARATH
ID WRK58_ARATH Reviewed; 423 AA.
AC Q93WU7; Q9MAC2;
DT 15-MAY-2002, integrated into UniProtKB/Swiss-Prot.
DT 03-MAY-2011, sequence version 2.
DT 25-MAY-2022, entry version 123.
DE RecName: Full=Probable WRKY transcription factor 58;
DE AltName: Full=WRKY DNA-binding protein 58;
GN Name=WRKY58; OrderedLocusNames=At3g01080; ORFNames=T4P13.24;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia; TISSUE=Flower;
RA Kushnir S., Ulker B., Somssich I.E.;
RT "Arabidopsis thaliana transcription factor WRKY58.";
RL Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: Transcription factor. Interacts specifically with the W box
CC (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-
CC acting element (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00223}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF26166.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF426254; AAL29431.1; -; mRNA.
DR EMBL; AC008261; AAF26166.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE73605.1; -; Genomic_DNA.
DR RefSeq; NP_001325618.1; NM_001337310.1.
DR RefSeq; NP_186757.2; NM_110973.3.
DR AlphaFoldDB; Q93WU7; -.
DR SMR; Q93WU7; -.
DR BioGRID; 6546; 1.
DR STRING; 3702.AT3G01080.1; -.
DR PaxDb; Q93WU7; -.
DR ProteomicsDB; 234417; -.
DR EnsemblPlants; AT3G01080.1; AT3G01080.1; AT3G01080.
DR GeneID; 821213; -.
DR Gramene; AT3G01080.1; AT3G01080.1; AT3G01080.
DR KEGG; ath:AT3G01080; -.
DR Araport; AT3G01080; -.
DR TAIR; locus:2102147; AT3G01080.
DR eggNOG; ENOG502QTWW; Eukaryota.
DR HOGENOM; CLU_012086_7_0_1; -.
DR InParanoid; Q93WU7; -.
DR OrthoDB; 847761at2759; -.
DR PRO; PR:Q93WU7; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q93WU7; baseline and differential.
DR Genevisible; Q93WU7; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IMP:TAIR.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0031347; P:regulation of defense response; IMP:TAIR.
DR Gene3D; 2.20.25.80; -; 2.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31221; PTHR31221; 1.
DR Pfam; PF03106; WRKY; 2.
DR SMART; SM00774; WRKY; 2.
DR SUPFAM; SSF118290; SSF118290; 2.
DR PROSITE; PS50811; WRKY; 2.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Repeat; Transcription;
KW Transcription regulation.
FT CHAIN 1..423
FT /note="Probable WRKY transcription factor 58"
FT /id="PRO_0000133699"
FT DNA_BIND 161..225
FT /note="WRKY 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT DNA_BIND 300..365
FT /note="WRKY 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT REGION 91..128
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 142..172
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 215..284
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 91..111
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 142..160
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 217..231
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 79
FT /note="H -> Q (in Ref. 1; AAL29431)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 423 AA; 47130 MW; 61E1419848C70D2B CRC64;
MAVEDDVSLI RTTTLVAPTR PTITVPHRPP AIETAAYFFG GGDGLSLSPG PLSFVSSLFV
DNFPDVLTPD NQRTTSFTHL LTSPMFFPPQ SSAHTGFIQP RQQSQPQPQR PDTFPHHMPP
STSVAVHGRQ SLDVSQVDQR ARNHYNNPGN NNNNRSYNVV NVDKPADDGY NWRKYGQKPI
KGCEYPRSYY KCTHVNCPVK KKVERSSDGQ ITQIIYKGQH DHERPQNRRG GGGRDSTEVG
GAGQMMESSD DSGYRKDHDD DDDDDEDDED LPASKIRRID GVSTTHRTVT EPKIIVQTKS
EVDLLDDGYR WRKYGQKVVK GNPHPRSYYK CTTPNCTVRK HVERASTDAK AVITTYEGKH
NHDVPAARNG TAAATAAAVG PSDHHRMRSM SGNNMQQHMS FGNNNNTGQS PVLLRLKEEK
ITI
