WRK62_ORYSI
ID WRK62_ORYSI Reviewed; 318 AA.
AC B8BF91; Q6IEL9;
DT 07-SEP-2016, integrated into UniProtKB/Swiss-Prot.
DT 03-MAR-2009, sequence version 1.
DT 03-AUG-2022, entry version 74.
DE RecName: Full=WRKY transcription factor WRKY62 {ECO:0000303|PubMed:15618416};
DE Short=OsWRKY62 {ECO:0000303|PubMed:15618416};
DE AltName: Full=XA21-binding protein 10 {ECO:0000303|PubMed:20118235};
GN Name=WRKY62 {ECO:0000303|PubMed:15618416};
GN Synonyms=XB10 {ECO:0000303|PubMed:20118235};
GN ORFNames=OsI_31380 {ECO:0000312|EMBL:EEC84578.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=15047897; DOI=10.1104/pp.103.034967;
RA Zhang Z.-L., Xie Z., Zou X., Casaretto J., Ho T.-H.D., Shen Q.J.;
RT "A rice WRKY gene encodes a transcriptional repressor of the gibberellin
RT signaling pathway in aleurone cells.";
RL Plant Physiol. 134:1500-1513(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [3]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15618416; DOI=10.1104/pp.104.054312;
RA Xie Z., Zhang Z.-L., Zou X., Huang J., Ruas P., Thompson D., Shen Q.J.;
RT "Annotations and functional analyses of the rice WRKY gene superfamily
RT reveal positive and negative regulators of abscisic acid signaling in
RT aleurone cells.";
RL Plant Physiol. 137:176-189(2005).
RN [4]
RP INDUCTION BY SALICYLIC ACID; MAGNAPORTHE GRISEA AND XANTHOMONAS ORYZAE.
RX PubMed=16528562; DOI=10.1007/s00299-006-0138-1;
RA Ryu H.-S., Han M., Lee S.-K., Cho J.-I., Ryoo N., Heu S., Lee Y.-H.,
RA Bhoo S.H., Wang G.-L., Hahn T.-R., Jeon J.-S.;
RT "A comprehensive expression analysis of the WRKY gene superfamily in rice
RT plants during defense response.";
RL Plant Cell Rep. 25:836-847(2006).
RN [5]
RP INTERACTION WITH XA21, AND INDUCTION BY XA21.
RX PubMed=20118235; DOI=10.1074/jbc.m109.093427;
RA Chen X., Chern M., Canlas P.E., Jiang C., Ruan D., Cao P., Ronald P.C.;
RT "A conserved threonine residue in the juxtamembrane domain of the XA21
RT pattern recognition receptor is critical for kinase autophosphorylation and
RT XA21-mediated immunity.";
RL J. Biol. Chem. 285:10454-10463(2010).
CC -!- FUNCTION: Transcription repressor. Interacts specifically with the W
CC box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive
CC cis-acting element. Regulates, probably indirectly, the activation of
CC defense-related genes during defense response (By similarity).
CC Regulates negatively basal innate immunity and XA21-mediated defense
CC against X.oryzae pv. oryzae (Xoo) (By similarity).
CC {ECO:0000250|UniProtKB:Q6EPZ0, ECO:0000250|UniProtKB:Q6QHD1}.
CC -!- SUBUNIT: Interacts with XA21 in the nucleus.
CC {ECO:0000269|PubMed:20118235}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q6QHD1,
CC ECO:0000255|PROSITE-ProRule:PRU00223}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=B8BF91-1; Sequence=Displayed;
CC Name=2;
CC IsoId=B8BF91-2; Sequence=VSP_058457;
CC -!- INDUCTION: Might be activated by XA21 in the nucleus upon pathogen
CC infection (PubMed:20118235). Induced by biotic elicitors (e.g. fungal
CC chitin oligosaccharide) (By similarity). Induced by pathogen infection
CC (e.g. M.grisea and X.oryzae pv. oryzae (Xoo)). Accumulates after
CC treatment with benzothiadiazole (BTH) and salicylic acid (SA)
CC (PubMed:16528562). Transactivated by WRKY45 (By similarity).
CC {ECO:0000250|UniProtKB:Q6EPZ0, ECO:0000269|PubMed:16528562,
CC ECO:0000303|PubMed:20118235}.
CC -!- DOMAIN: The WRKY domain is required to bind DNA.
CC {ECO:0000250|UniProtKB:Q6QHD1}.
CC -!- SIMILARITY: Belongs to the WRKY group II-a family. {ECO:0000305}.
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DR EMBL; BK005065; DAA05127.1; -; Genomic_DNA.
DR EMBL; CM000134; EEC84578.1; -; Genomic_DNA.
DR AlphaFoldDB; B8BF91; -.
DR SMR; B8BF91; -.
DR STRING; 39946.B8BF91; -.
DR EnsemblPlants; BGIOSGA029757-TA; BGIOSGA029757-PA; BGIOSGA029757. [B8BF91-1]
DR Gramene; BGIOSGA029757-TA; BGIOSGA029757-PA; BGIOSGA029757. [B8BF91-1]
DR HOGENOM; CLU_047067_0_1_1; -.
DR OMA; FMHALTY; -.
DR Proteomes; UP000007015; Chromosome 9.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR GO; GO:1900425; P:negative regulation of defense response to bacterium; IEA:EnsemblPlants.
DR GO; GO:0009617; P:response to bacterium; IEP:UniProtKB.
DR GO; GO:0010200; P:response to chitin; ISS:UniProtKB.
DR GO; GO:0009620; P:response to fungus; IEP:UniProtKB.
DR GO; GO:0009751; P:response to salicylic acid; IEP:UniProtKB.
DR Gene3D; 2.20.25.80; -; 1.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31429; PTHR31429; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; SSF118290; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 1: Evidence at protein level;
KW Alternative splicing; ATP-binding; Coiled coil; DNA-binding;
KW Nucleotide-binding; Nucleus; Plant defense; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..318
FT /note="WRKY transcription factor WRKY62"
FT /id="PRO_0000436957"
FT DNA_BIND 138..204
FT /note="WRKY"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 65..86
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 100..136
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 29..49
FT /evidence="ECO:0000255"
FT BINDING 259..266
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00289"
FT VAR_SEQ 1..39
FT /note="Missing (in isoform 2)"
FT /id="VSP_058457"
SQ SEQUENCE 318 AA; 33515 MW; D5C96CAE89B5637C CRC64;
MDDDGDGSSS PTDDSAAAGL LPLFSRSPAE DLEEKLRRAM EENARLTRAL DAILAGHHAH
QRALLAPSLS PPPPSATARA PSVSTSCAAR EDAAPAVAAA AASTACPSRQ QPPTAEPRPK
VRTVRVRADA ADATDANSMA ETVKDGYQWR KYGQKVTRDN PYPRAYFRCA FAPSCPVKKK
LQRCAEDRSM LVATYEGEHN HALSTQTTEF VASGCTTSQH AGGSSSSPLP CSISINSSGR
TITLDLTNQA GSGSIASCGV EAAAVSGELV TVLSPELRRH LVEEVVQVLK NDAEFVEAVT
NAVAARVVDQ IPHIPVHL
