WRKY3_ARATH
ID WRKY3_ARATH Reviewed; 513 AA.
AC Q9ZQ70;
DT 15-MAY-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 03-AUG-2022, entry version 138.
DE RecName: Full=Probable WRKY transcription factor 3;
DE AltName: Full=WRKY DNA-binding protein 3;
GN Name=WRKY3; OrderedLocusNames=At2g03340; ORFNames=T4M8.23;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE, AND INDUCTION.
RX PubMed=11449049; DOI=10.2307/3871384;
RA Yu D., Chen C., Chen Z.;
RT "Evidence for an important role of WRKY DNA binding proteins in the
RT regulation of NPR1 gene expression.";
RL Plant Cell 13:1527-1540(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP TISSUE SPECIFICITY, AND INDUCTION.
RX PubMed=11722756; DOI=10.1046/j.1365-313x.2001.01131.x;
RA Robatzek S., Somssich I.E.;
RT "A new member of the Arabidopsis WRKY transcription factor family, AtWRKY6,
RT is associated with both senescence- and defence-related processes.";
RL Plant J. 28:123-133(2001).
CC -!- FUNCTION: Transcription factor. Interacts specifically with the W box
CC (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-
CC acting element (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: In young, mature and senescent leaves.
CC {ECO:0000269|PubMed:11722756}.
CC -!- INDUCTION: By salicylic acid and during leaf senescence.
CC {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
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DR EMBL; AF224701; AAK28311.1; -; mRNA.
DR EMBL; AC006284; AAD17441.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC05689.1; -; Genomic_DNA.
DR PIR; C84447; C84447.
DR RefSeq; NP_178433.1; NM_126385.4.
DR AlphaFoldDB; Q9ZQ70; -.
DR SMR; Q9ZQ70; -.
DR BioGRID; 265; 3.
DR IntAct; Q9ZQ70; 1.
DR STRING; 3702.AT2G03340.1; -.
DR iPTMnet; Q9ZQ70; -.
DR PaxDb; Q9ZQ70; -.
DR PRIDE; Q9ZQ70; -.
DR ProteomicsDB; 246483; -.
DR EnsemblPlants; AT2G03340.1; AT2G03340.1; AT2G03340.
DR GeneID; 814863; -.
DR Gramene; AT2G03340.1; AT2G03340.1; AT2G03340.
DR KEGG; ath:AT2G03340; -.
DR Araport; AT2G03340; -.
DR TAIR; locus:2063835; AT2G03340.
DR eggNOG; ENOG502QTWW; Eukaryota.
DR HOGENOM; CLU_012086_7_0_1; -.
DR InParanoid; Q9ZQ70; -.
DR OMA; DSECRSF; -.
DR OrthoDB; 847761at2759; -.
DR PhylomeDB; Q9ZQ70; -.
DR PRO; PR:Q9ZQ70; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9ZQ70; baseline and differential.
DR Genevisible; Q9ZQ70; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR Gene3D; 2.20.25.80; -; 2.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31221; PTHR31221; 1.
DR Pfam; PF03106; WRKY; 2.
DR SMART; SM00774; WRKY; 2.
DR SUPFAM; SSF118290; SSF118290; 2.
DR PROSITE; PS50811; WRKY; 2.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Repeat; Transcription;
KW Transcription regulation.
FT CHAIN 1..513
FT /note="Probable WRKY transcription factor 3"
FT /id="PRO_0000133646"
FT DNA_BIND 244..308
FT /note="WRKY 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT DNA_BIND 409..474
FT /note="WRKY 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 175..281
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 297..394
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 175..241
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 308..363
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 364..386
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 513 AA; 56284 MW; F5042163E27EB8B1 CRC64;
MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK
SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG GSGGDVDPRF KQSRPTGLMI
TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ
SQQSEYPSST QQQQQQQQQA SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS
QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE
VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE PRIIVQTTSE VDLLDDGYRW
RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS
HQLRPNNQHN TSTVNFNHQQ PVARLRLKEE QIT
