WRKY9_ARATH
ID WRKY9_ARATH Reviewed; 374 AA.
AC Q9C9F0; C0SV22;
DT 15-MAY-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 123.
DE RecName: Full=Probable WRKY transcription factor 9 {ECO:0000305};
DE AltName: Full=WRKY DNA-binding protein 9 {ECO:0000305};
GN Name=WRKY9 {ECO:0000312|EMBL:AAL11006.1};
GN OrderedLocusNames=At1g68150 {ECO:0000312|Araport:AT1G68150};
GN ORFNames=T22E19.22 {ECO:0000312|EMBL:AAG52604.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia; TISSUE=Flower;
RA Ulker B., Kushnir S., Somssich I.E.;
RT "Arabidopsis thaliana transcription factor WRKY9.";
RL Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA Takagi M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP INDUCTION BY POTASSIUM DEPRIVATION.
RX PubMed=15173595; DOI=10.1073/pnas.0401707101;
RA Shin R., Schachtman D.P.;
RT "Hydrogen peroxide mediates plant root cell response to nutrient
RT deprivation.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:8827-8832(2004).
CC -!- FUNCTION: Transcription factor. Interacts specifically with the W box
CC (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-
CC acting element (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00223}.
CC -!- INDUCTION: Induced by potassium deprivation.
CC {ECO:0000269|PubMed:15173595}.
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DR EMBL; AY052645; AAL11006.1; -; mRNA.
DR EMBL; AC016447; AAG52604.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE34757.1; -; Genomic_DNA.
DR EMBL; AB493525; BAH30363.1; -; mRNA.
DR PIR; G96704; G96704.
DR RefSeq; NP_176982.1; NM_105485.4.
DR AlphaFoldDB; Q9C9F0; -.
DR SMR; Q9C9F0; -.
DR BioGRID; 28364; 16.
DR IntAct; Q9C9F0; 16.
DR STRING; 3702.AT1G68150.1; -.
DR PaxDb; Q9C9F0; -.
DR PRIDE; Q9C9F0; -.
DR ProteomicsDB; 246421; -.
DR EnsemblPlants; AT1G68150.1; AT1G68150.1; AT1G68150.
DR GeneID; 843143; -.
DR Gramene; AT1G68150.1; AT1G68150.1; AT1G68150.
DR KEGG; ath:AT1G68150; -.
DR Araport; AT1G68150; -.
DR TAIR; locus:2199317; AT1G68150.
DR eggNOG; ENOG502QU92; Eukaryota.
DR HOGENOM; CLU_021824_0_0_1; -.
DR InParanoid; Q9C9F0; -.
DR OMA; HLEMKFP; -.
DR OrthoDB; 1393425at2759; -.
DR PhylomeDB; Q9C9F0; -.
DR PRO; PR:Q9C9F0; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C9F0; baseline and differential.
DR Genevisible; Q9C9F0; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 2.20.25.80; -; 1.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR044810; WRKY_plant.
DR PANTHER; PTHR31429; PTHR31429; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SUPFAM; SSF118290; SSF118290; 1.
DR PROSITE; PS50811; WRKY; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..374
FT /note="Probable WRKY transcription factor 9"
FT /id="PRO_0000133651"
FT DNA_BIND 229..295
FT /note="WRKY"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00223"
FT REGION 40..90
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 157..201
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 355..374
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 87..121
FT /evidence="ECO:0000255"
FT COMPBIAS 40..58
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 59..73
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 74..90
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 175..194
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 374 AA; 42743 MW; FC4265692892B41D CRC64;
MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS RENKEDEEHD
ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ MESVKEENTR LRKLVEQTLE
DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE
KKQKQEESKE AVQSHHQRYN SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW
RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG
DHVSSSQNRL NWMM
