WRT5_CAEEL
ID WRT5_CAEEL Reviewed; 176 AA.
AC Q9U7D3; O02116; Q1RS88;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 12-DEC-2006, sequence version 2.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Warthog protein 5;
DE Flags: Precursor;
GN Name=wrt-5; ORFNames=W03D2.5;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM A), NOMENCLATURE, TISSUE SPECIFICITY,
RP AND DEVELOPMENTAL STAGE.
RX PubMed=10523520; DOI=10.1101/gr.9.10.909;
RA Aspoeck G., Kagoshima H., Niklaus G., Buerglin T.R.;
RT "Caenorhabditis elegans has scores of hedgehog-related genes: sequence and
RT expression analysis.";
RL Genome Res. 9:909-923(1999).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND ALTERNATIVE SPLICING.
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [3]
RP FUNCTION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, SUBCELLULAR LOCATION,
RP AND DISRUPTION PHENOTYPE.
RX PubMed=16413526; DOI=10.1016/j.ydbio.2005.11.028;
RA Hao L., Aspoeck G., Buerglin T.R.;
RT "The hedgehog-related gene wrt-5 is essential for hypodermal development in
RT Caenorhabditis elegans.";
RL Dev. Biol. 290:323-336(2006).
CC -!- FUNCTION: Intercellular signal essential for a variety of patterning
CC events during development. {ECO:0000269|PubMed:16413526}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:16413526}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=a;
CC IsoId=Q9U7D3-1; Sequence=Displayed;
CC Name=b;
CC IsoId=Q9U7D3-2; Sequence=VSP_021976, VSP_021977;
CC -!- TISSUE SPECIFICITY: Expressed in seam cells, excretory cell,
CC reproductive system, pharynx, pharyngeal-intestinal valve cells,
CC neurons and neuronal support cells. {ECO:0000269|PubMed:10523520,
CC ECO:0000269|PubMed:16413526}.
CC -!- DEVELOPMENTAL STAGE: Expressed in the seam cells of 1.2-fold embryos.
CC {ECO:0000269|PubMed:10523520, ECO:0000269|PubMed:16413526}.
CC -!- DISRUPTION PHENOTYPE: Worms either die at embryonic or larval stages
CC (43%), or exhibit variable abnormal morphology.
CC {ECO:0000269|PubMed:16413526}.
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DR EMBL; AF139520; AAD33830.1; -; mRNA.
DR EMBL; FO080786; CCD66761.1; -; Genomic_DNA.
DR EMBL; FO080786; CCD66762.1; -; Genomic_DNA.
DR PIR; T28762; T28762.
DR RefSeq; NP_001040994.1; NM_001047529.2. [Q9U7D3-1]
DR RefSeq; NP_001040995.1; NM_001047530.2. [Q9U7D3-2]
DR AlphaFoldDB; Q9U7D3; -.
DR BioGRID; 42298; 1.
DR DIP; DIP-24286N; -.
DR IntAct; Q9U7D3; 1.
DR STRING; 6239.W03D2.5a; -.
DR PaxDb; Q9U7D3; -.
DR PeptideAtlas; Q9U7D3; -.
DR EnsemblMetazoa; W03D2.5a.1; W03D2.5a.1; WBGene00006951. [Q9U7D3-1]
DR EnsemblMetazoa; W03D2.5b.1; W03D2.5b.1; WBGene00006951. [Q9U7D3-2]
DR GeneID; 177162; -.
DR KEGG; cel:CELE_W03D2.5; -.
DR UCSC; W03D2.5b; c. elegans. [Q9U7D3-1]
DR CTD; 177162; -.
DR WormBase; W03D2.5a; CE14514; WBGene00006951; wrt-5. [Q9U7D3-1]
DR WormBase; W03D2.5b; CE33717; WBGene00006951; wrt-5. [Q9U7D3-2]
DR eggNOG; KOG3638; Eukaryota.
DR HOGENOM; CLU_130582_0_0_1; -.
DR InParanoid; Q9U7D3; -.
DR OMA; PFGIEVH; -.
DR OrthoDB; 1513122at2759; -.
DR PhylomeDB; Q9U7D3; -.
DR PRO; PR:Q9U7D3; -.
DR Proteomes; UP000001940; Chromosome IV.
DR Bgee; WBGene00006951; Expressed in pharyngeal muscle cell (C elegans) and 3 other tissues.
DR ExpressionAtlas; Q9U7D3; baseline and differential.
DR GO; GO:0005576; C:extracellular region; ISS:WormBase.
DR GO; GO:0005102; F:signaling receptor binding; ISS:WormBase.
DR GO; GO:0007154; P:cell communication; ISS:WormBase.
DR InterPro; IPR031131; Warthog_3/5.
DR PANTHER; PTHR46706:SF2; PTHR46706:SF2; 2.
PE 2: Evidence at transcript level;
KW Alternative splicing; Developmental protein; Glycoprotein;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..21
FT /evidence="ECO:0000255"
FT CHAIN 22..176
FT /note="Warthog protein 5"
FT /id="PRO_0000268642"
FT CARBOHYD 70
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT VAR_SEQ 1..87
FT /note="Missing (in isoform b)"
FT /evidence="ECO:0000305"
FT /id="VSP_021976"
FT VAR_SEQ 105
FT /note="K -> KVGIFGGKFEKIGGIFHENPNFQ (in isoform b)"
FT /evidence="ECO:0000305"
FT /id="VSP_021977"
FT CONFLICT 118
FT /note="E -> K (in Ref. 1; AAD33830)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 176 AA; 20134 MW; 08AE43250576D7C3 CRC64;
MCSMWLMASW LMAFVAGSTL ADYCGDHKVP FGMEVHKNGN VNILCSRPSC HEKKYAECPE
RATSTTCSTN SSWVGGVTQH SDGSLRLMCC EYDLLPTYST IQYEKLTIRT GEYFEGDEQM
EGDVVTAFDL IGNIEQVKEP DGKYSYNLLI YRYHCGNIPD TPPAWYMKKQ WPYWEK