WSB1_XENTR
ID WSB1_XENTR Reviewed; 422 AA.
AC Q6P1V3;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 125.
DE RecName: Full=WD repeat and SOCS box-containing protein 1;
DE Short=WSB-1;
GN Name=wsb1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Probable substrate-recognition component of a SCF-like ECS
CC (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex
CC which mediates the ubiquitination and subsequent proteasomal
CC degradation of target proteins. {ECO:0000250}.
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC -!- SUBUNIT: Component of a probable ECS E3 ubiquitin-protein ligase
CC complex that contains the Elongin BC complex. {ECO:0000250}.
CC -!- DOMAIN: The SOCS box domain mediates the interaction with the Elongin
CC BC complex, an adapter module in different E3 ubiquitin ligase
CC complexes. {ECO:0000250}.
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DR EMBL; BC064858; AAH64858.1; -; mRNA.
DR RefSeq; NP_989387.1; NM_204056.1.
DR AlphaFoldDB; Q6P1V3; -.
DR SMR; Q6P1V3; -.
DR STRING; 8364.ENSXETP00000046179; -.
DR PaxDb; Q6P1V3; -.
DR DNASU; 395021; -.
DR Ensembl; ENSXETT00000046179; ENSXETP00000046179; ENSXETG00000021353.
DR GeneID; 395021; -.
DR KEGG; xtr:395021; -.
DR CTD; 26118; -.
DR Xenbase; XB-GENE-5920309; wsb1.
DR eggNOG; KOG0266; Eukaryota.
DR HOGENOM; CLU_056876_0_0_1; -.
DR InParanoid; Q6P1V3; -.
DR OMA; CTIDAGE; -.
DR OrthoDB; 805365at2759; -.
DR PhylomeDB; Q6P1V3; -.
DR TreeFam; TF329216; -.
DR Reactome; R-XTR-8951664; Neddylation.
DR Reactome; R-XTR-983168; Antigen processing: Ubiquitination & Proteasome degradation.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000008143; Chromosome 2.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000021353; Expressed in testis and 22 other tissues.
DR ExpressionAtlas; Q6P1V3; differential.
DR GO; GO:0035556; P:intracellular signal transduction; IEA:InterPro.
DR GO; GO:0000209; P:protein polyubiquitination; IBA:GO_Central.
DR Gene3D; 2.130.10.10; -; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR001496; SOCS_box.
DR InterPro; IPR036036; SOCS_box-like_dom_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR Pfam; PF07525; SOCS_box; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00253; SOCS; 1.
DR SMART; SM00969; SOCS_box; 1.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF158235; SSF158235; 1.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS50225; SOCS; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 5.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat; Ubl conjugation pathway; WD repeat.
FT CHAIN 1..422
FT /note="WD repeat and SOCS box-containing protein 1"
FT /id="PRO_0000347228"
FT REPEAT 124..165
FT /note="WD 1"
FT REPEAT 168..208
FT /note="WD 2"
FT REPEAT 212..251
FT /note="WD 3"
FT REPEAT 254..293
FT /note="WD 4"
FT REPEAT 309..346
FT /note="WD 5"
FT DOMAIN 374..422
FT /note="SOCS box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00194"
SQ SEQUENCE 422 AA; 47496 MW; C216C3482782359D CRC64;
MASFPDFVNE NEIARSRTIG ELITPTSPFE QKYGRENWTV AFAPDGSYFA WSQGHRIVKL
VPWSRCLKNF TACSTKNGVN LTNGRLSRQN SDLGQRNKPI EHTIDCGDIV WSLAFGSSVP
EKQSRCVNIE WHRFKFGQDQ LLLATGLSNG RIKIWDVYTG KLLLNLMDHT EVVRDLTFAP
DGSLILVSAS RDKTLRVWDL KDDGNMMKVL RGHQNWVYCC AFSPDSSMLC SVGAGKAVFL
WDMDKYTMIR KLDGHYNDVV ACEFSPDGAL LATASYDTRV YVWDPHIGSI LFEFGHLFPP
PTPIFAGGDN GRWVKSVSFS HDGVHIASLA DDNLVRFWRI DKSYPVEVAP LSKGLCCAFS
TDGSVLAAGT QDGNAYFWST PKYVSSLQHL CRMAIRRVMN TNEVKKLPIP QKIMEFLTYQ
TM