ID   WTF9_ARATH              Reviewed;         387 AA.
AC   Q9ZUZ6;
DT   10-OCT-2018, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-1999, sequence version 1.
DT   03-AUG-2022, entry version 114.
DE   RecName: Full=Protein WHAT'S THIS FACTOR 9, mitochondrial {ECO:0000303|PubMed:22060106};
DE   Flags: Precursor;
GN   Name=WTF9 {ECO:0000303|PubMed:22060106};
GN   OrderedLocusNames=At2g39120 {ECO:0000312|Araport:AT2G39120};
GN   ORFNames=T7F6.29 {ECO:0000312|EMBL:AAC79622.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617197; DOI=10.1038/45471;
RA   Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA   Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA   Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA   Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA   Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA   Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA   Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT   "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL   Nature 402:761-768(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   FUNCTION, DISRUPTION PHENOTYPE, AND SUBCELLULAR LOCATION.
RX   PubMed=22060106; DOI=10.1111/j.1365-313x.2011.04849.x;
RA   des Francs-Small C.C., Kroeger T., Zmudjak M., Ostersetzer-Biran O.,
RA   Rahimi N., Small I., Barkan A.;
RT   "A PORR domain protein required for rpl2 and ccmF(C) intron splicing and
RT   for the biogenesis of c-type cytochromes in Arabidopsis mitochondria.";
RL   Plant J. 69:996-1005(2012).
CC   -!- FUNCTION: RNA-binding protein involved in group II intron splicing.
CC       Binds specific group II introns and promotes their splicing (e.g. rpl2
CC       and ccmFC). {ECO:0000269|PubMed:22060106}.
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000269|PubMed:22060106}.
CC   -!- DISRUPTION PHENOTYPE: Severely stunted shoots and roots, small flowers
CC       with very small anthers and little pollen, and very small siliques
CC       containing only a few aborted seeds. Impaired splicing of rpl2 and
CC       ccmFC mRNAs. Absence of c-type cytochromes, complex III and cytochrome
CC       oxidase. {ECO:0000269|PubMed:22060106}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AC005770; AAC79622.1; -; Genomic_DNA.
DR   EMBL; CP002685; AEC09637.1; -; Genomic_DNA.
DR   PIR; D84813; D84813.
DR   RefSeq; NP_181445.1; NM_129469.2.
DR   AlphaFoldDB; Q9ZUZ6; -.
DR   STRING; 3702.AT2G39120.1; -.
DR   PaxDb; Q9ZUZ6; -.
DR   PRIDE; Q9ZUZ6; -.
DR   ProteomicsDB; 242726; -.
DR   EnsemblPlants; AT2G39120.1; AT2G39120.1; AT2G39120.
DR   GeneID; 818498; -.
DR   Gramene; AT2G39120.1; AT2G39120.1; AT2G39120.
DR   KEGG; ath:AT2G39120; -.
DR   Araport; AT2G39120; -.
DR   TAIR; locus:2064940; AT2G39120.
DR   eggNOG; ENOG502QPKI; Eukaryota.
DR   HOGENOM; CLU_024287_1_1_1; -.
DR   InParanoid; Q9ZUZ6; -.
DR   OMA; LCLRQHL; -.
DR   OrthoDB; 894886at2759; -.
DR   PhylomeDB; Q9ZUZ6; -.
DR   PRO; PR:Q9ZUZ6; -.
DR   Proteomes; UP000006548; Chromosome 2.
DR   ExpressionAtlas; Q9ZUZ6; baseline and differential.
DR   GO; GO:0005739; C:mitochondrion; IDA:TAIR.
DR   GO; GO:0003723; F:RNA binding; IDA:TAIR.
DR   GO; GO:0017004; P:cytochrome complex assembly; IMP:TAIR.
DR   GO; GO:0000373; P:Group II intron splicing; IMP:TAIR.
DR   GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR   InterPro; IPR021099; PORR_domain.
DR   InterPro; IPR045040; PORR_fam.
DR   PANTHER; PTHR31476; PTHR31476; 1.
DR   Pfam; PF11955; PORR; 1.
PE   4: Predicted;
KW   Mitochondrion; mRNA processing; mRNA splicing; Reference proteome;
KW   RNA-binding; Transit peptide.
FT   TRANSIT         1..24
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           25..387
FT                   /note="Protein WHAT'S THIS FACTOR 9, mitochondrial"
FT                   /id="PRO_0000445475"
FT   DOMAIN          32..358
FT                   /note="PORR"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   387 AA;  45208 MW;  A83476F74DC72A95 CRC64;
     MLSIRRHAKT VASSCTNLTQ KRTYVDVYMK WKRDPYFDNI EHILRSSQLK SVVSLKNCIV
     QEPNRCIPIS AISKKTRQFD VSTKIAHFLR KFPSIFEEFV GPEYNLPWFR LTPEATELDR
     QERVVYQTSA DDLRDRLKKL ILMSKDNVLP LSIVQGMKWY LGLPDDYLQF PDMNLDSSFR
     FVDMEDGVKG LAVDYNGGDK VLSVLQKNAM KKRRGEVSLE EIEFPLFPSK GCRLRVKIED
     WLMEFQKLPY VSPYDDYSCL DPSSDIAEKR VVGFLHELLC LFVEHSAERK KLLCLKKHFG
     LPQKVHKAFE RHPQIFYLSM KNKTCTAILR EPYRDKASVE THPVLGVRKK YIQLMKNSEL
     ILKSRRNSFG FRDEGVVDKD LDLDFEG