ID   XB35_ORYSJ              Reviewed;         495 AA.
AC   Q7EZ44; A0A0P0XDI3;
DT   13-JUL-2010, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 127.
DE   RecName: Full=Probable E3 ubiquitin-protein ligase XBOS35;
DE            EC=2.3.2.27;
DE   AltName: Full=Ankyrin repeat domain and RING finger-containing protein XBOS35;
DE   AltName: Full=RING-type E3 ubiquitin transferase XBOS35;
DE   AltName: Full=XB3 protein homolog 5;
GN   Name=XBOS35; OrderedLocusNames=Os08g0258200, LOC_Os08g15840;
GN   ORFNames=B1015H11.105, OsJ_26639;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC         [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC         cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC         EC=2.3.2.27;
CC   -!- PATHWAY: Protein modification; protein ubiquitination.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AP005123; BAC98626.1; -; Genomic_DNA.
DR   EMBL; AP008214; BAF23300.1; -; Genomic_DNA.
DR   EMBL; AP014964; BAT04589.1; -; Genomic_DNA.
DR   EMBL; CM000145; EAZ42077.1; -; Genomic_DNA.
DR   EMBL; AK067289; BAG90353.1; -; mRNA.
DR   RefSeq; XP_015650786.1; XM_015795300.1.
DR   AlphaFoldDB; Q7EZ44; -.
DR   SMR; Q7EZ44; -.
DR   STRING; 4530.OS08T0258200-02; -.
DR   iPTMnet; Q7EZ44; -.
DR   PaxDb; Q7EZ44; -.
DR   PRIDE; Q7EZ44; -.
DR   EnsemblPlants; Os08t0258200-01; Os08t0258200-01; Os08g0258200.
DR   EnsemblPlants; Os08t0258200-02; Os08t0258200-02; Os08g0258200.
DR   GeneID; 4345102; -.
DR   Gramene; Os08t0258200-01; Os08t0258200-01; Os08g0258200.
DR   Gramene; Os08t0258200-02; Os08t0258200-02; Os08g0258200.
DR   KEGG; osa:4345102; -.
DR   eggNOG; ENOG502QR1Y; Eukaryota.
DR   HOGENOM; CLU_035461_0_0_1; -.
DR   InParanoid; Q7EZ44; -.
DR   OMA; HRSDYIN; -.
DR   OrthoDB; 539223at2759; -.
DR   UniPathway; UPA00143; -.
DR   Proteomes; UP000000763; Chromosome 8.
DR   Proteomes; UP000007752; Chromosome 8.
DR   Proteomes; UP000059680; Chromosome 8.
DR   Genevisible; Q7EZ44; OS.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR   GO; GO:0044260; P:cellular macromolecule metabolic process; IEA:UniProt.
DR   GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR   Gene3D; 1.25.40.20; -; 2.
DR   Gene3D; 3.30.40.10; -; 1.
DR   InterPro; IPR002110; Ankyrin_rpt.
DR   InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR   InterPro; IPR001841; Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR017907; Znf_RING_CS.
DR   Pfam; PF00023; Ank; 1.
DR   Pfam; PF12796; Ank_2; 2.
DR   PRINTS; PR01415; ANKYRIN.
DR   SMART; SM00248; ANK; 6.
DR   SMART; SM00184; RING; 1.
DR   SUPFAM; SSF48403; SSF48403; 1.
DR   PROSITE; PS50297; ANK_REP_REGION; 1.
DR   PROSITE; PS50088; ANK_REPEAT; 5.
DR   PROSITE; PS00518; ZF_RING_1; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   2: Evidence at transcript level;
KW   ANK repeat; Metal-binding; Reference proteome; Repeat; Transferase;
KW   Ubl conjugation pathway; Zinc; Zinc-finger.
FT   CHAIN           1..495
FT                   /note="Probable E3 ubiquitin-protein ligase XBOS35"
FT                   /id="PRO_0000395749"
FT   REPEAT          50..79
FT                   /note="ANK 1"
FT   REPEAT          83..112
FT                   /note="ANK 2"
FT   REPEAT          117..147
FT                   /note="ANK 3"
FT   REPEAT          180..209
FT                   /note="ANK 4"
FT   REPEAT          223..252
FT                   /note="ANK 5"
FT   ZN_FING         321..371
FT                   /note="RING-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00175"
SQ   SEQUENCE   495 AA;  53082 MW;  E98F4B831A090663 CRC64;
     MGLLGMVGDS FGCSATGERL VSAARDGDIQ EAMALLELNP RLARYSTFGI RNSPLHYSAA
     KGHHEIVSLL IESGVDINLR NCRGQTALMQ ACLYGHWKVV QILVLFKANI HKKDCFSGAT
     AIHFAALKGH TRCLRLLVAD YVPSLPEFWS VMHAKCTDET NKEAFDAVAL RRLINNKSDG
     GVTPLHLAAL HGHAECVQLL LDLGASVSEV TINDGSTIDL IGSGSTPLHY AACGGSAVCC
     QLLVAAGANM RAQNTNGLTP LMVARSWHKS SVEGILTKRS EVPVRILPSS YLSLPLMSIV
     KIARECGWRK TSVSSVCHDP CAICLDTECT VSAEGCGHEF CTKCALYLCA TASSSTSIRG
     VPGSIPCPLC RHTIVSFVRL TSTTPIKELP WTNKSLALCA AGASTGSKYA GPAAITSSKY
     AGSLHRRSEM RSLRSSSVDL GCSSFRTASS GKLSSIKLNC TGADETMPCL VNCFRPDVQR
     SSSYRERIRR YSQFS