XB36_ORYSJ
ID XB36_ORYSJ Reviewed; 420 AA.
AC Q4JHE0; Q0DEY4;
DT 13-JUL-2010, integrated into UniProtKB/Swiss-Prot.
DT 02-AUG-2005, sequence version 1.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=Probable E3 ubiquitin-protein ligase XBOS36;
DE EC=2.3.2.27;
DE AltName: Full=Ankyrin repeat domain and RING finger-containing protein XBOS36;
DE AltName: Full=RING-type E3 ubiquitin transferase XBOS36;
DE AltName: Full=XB3 protein homolog 6;
GN Name=XBOS36; OrderedLocusNames=Os06g0128700, LOC_Os06g03800;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=17172358; DOI=10.1105/tpc.106.046730;
RA Wang Y.S., Pi L.Y., Chen X., Chakrabarty P.K., Jiang J., De Leon A.L.,
RA Liu G.Z., Li L., Benny U., Oard J., Ronald P.C., Song W.Y.;
RT "Rice XA21 binding protein 3 is a ubiquitin ligase required for full Xa21-
RT mediated disease resistance.";
RL Plant Cell 18:3635-3646(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27;
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAF18589.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; DQ088999; AAY88733.1; -; mRNA.
DR EMBL; AP008212; BAF18589.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014962; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_015640865.1; XM_015785379.1.
DR AlphaFoldDB; Q4JHE0; -.
DR SMR; Q4JHE0; -.
DR STRING; 4530.OS06T0128700-01; -.
DR PaxDb; Q4JHE0; -.
DR PRIDE; Q4JHE0; -.
DR GeneID; 4339988; -.
DR KEGG; osa:4339988; -.
DR eggNOG; ENOG502QR1Y; Eukaryota.
DR InParanoid; Q4JHE0; -.
DR OrthoDB; 924880at2759; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000000763; Chromosome 6.
DR Proteomes; UP000059680; Chromosome 6.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0044260; P:cellular macromolecule metabolic process; IEA:UniProt.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR Gene3D; 1.25.40.20; -; 2.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR Pfam; PF00023; Ank; 1.
DR Pfam; PF12796; Ank_2; 2.
DR PRINTS; PR01415; ANKYRIN.
DR SMART; SM00248; ANK; 5.
DR SUPFAM; SSF48403; SSF48403; 1.
DR PROSITE; PS50297; ANK_REP_REGION; 1.
DR PROSITE; PS50088; ANK_REPEAT; 5.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 2: Evidence at transcript level;
KW ANK repeat; Metal-binding; Reference proteome; Repeat; Transferase;
KW Ubl conjugation pathway; Zinc; Zinc-finger.
FT CHAIN 1..420
FT /note="Probable E3 ubiquitin-protein ligase XBOS36"
FT /id="PRO_0000395750"
FT REPEAT 44..73
FT /note="ANK 1"
FT REPEAT 77..106
FT /note="ANK 2"
FT REPEAT 111..140
FT /note="ANK 3"
FT REPEAT 149..178
FT /note="ANK 4"
FT REPEAT 193..222
FT /note="ANK 5"
FT ZN_FING 296..345
FT /note="RING-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00175"
FT REGION 355..397
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 420 AA; 43457 MW; A241F021468E00EF CRC64;
MGNSLGCVGL GERLAAAAKD GDAAEAQRLL AANPGLARCT TFGNLNSPLH VAAAKGHHEI
AALLLENGAD VNARNIYGQT PLMQACRFGH WEVVQTLLVF RCNVWRVENL SGRTALHMAA
AGGHVKCVRL LVADAAGDRD GYVNKAANGG VTALHLAALH GHVECVHLLI DERASLAAQT
LPCAAPPMAS IGAGSTPLHY AACGGEVKCC QILVSRGADR TAINCNGWLP IDAARIWGCN
WLEHVLSPKS HLPIPKFPPS GYLSQPLPSL IAIAREQGLN LSSEVSDGFD EGADACAVCL
ERPCTVAAEG CDHELCVKCA MDLCSVIKSY DSAGIAGEIP CPLCRTGIAS FRTTAAPPPP
SLAGSPARRS RRNNSGGGGG EHEASNSGGS EKGYGSIDPD AGAVVPLYYA PPFAPSAILT