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XCT_ORYSI
ID   XCT_ORYSI               Reviewed;         333 AA.
AC   B8BDW1;
DT   03-NOV-2009, integrated into UniProtKB/Swiss-Prot.
DT   03-MAR-2009, sequence version 1.
DT   03-AUG-2022, entry version 59.
DE   RecName: Full=Protein XAP5 CIRCADIAN TIMEKEEPER;
GN   Name=XCT; ORFNames=OsI_32174;
OS   Oryza sativa subsp. indica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39946;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. 93-11;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
CC   -!- FUNCTION: Involved in light regulation of the circadian clock and
CC       photomorphogenesis. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the FAM50 family. {ECO:0000305}.
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DR   EMBL; CM000134; EEC84953.1; -; Genomic_DNA.
DR   AlphaFoldDB; B8BDW1; -.
DR   STRING; 39946.B8BDW1; -.
DR   iPTMnet; B8BDW1; -.
DR   EnsemblPlants; BGIOSGA031154-TA; BGIOSGA031154-PA; BGIOSGA031154.
DR   Gramene; BGIOSGA031154-TA; BGIOSGA031154-PA; BGIOSGA031154.
DR   HOGENOM; CLU_037985_1_1_1; -.
DR   OMA; DFIWVFL; -.
DR   Proteomes; UP000007015; Chromosome 9.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0009873; P:ethylene-activated signaling pathway; IEA:EnsemblPlants.
DR   GO; GO:0035196; P:miRNA processing; IEA:EnsemblPlants.
DR   GO; GO:0042752; P:regulation of circadian rhythm; IEA:EnsemblPlants.
DR   GO; GO:0010099; P:regulation of photomorphogenesis; IEA:EnsemblPlants.
DR   GO; GO:0009637; P:response to blue light; IEA:EnsemblPlants.
DR   GO; GO:0010114; P:response to red light; IEA:EnsemblPlants.
DR   GO; GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
DR   InterPro; IPR007005; XAP5.
DR   PANTHER; PTHR12722; PTHR12722; 2.
DR   Pfam; PF04921; XAP5; 1.
PE   3: Inferred from homology;
KW   Biological rhythms; Coiled coil; Nucleus; Reference proteome.
FT   CHAIN           1..333
FT                   /note="Protein XAP5 CIRCADIAN TIMEKEEPER"
FT                   /id="PRO_0000388468"
FT   REGION          89..171
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          12..43
FT                   /evidence="ECO:0000255"
FT   COILED          70..116
FT                   /evidence="ECO:0000255"
FT   COMPBIAS        89..109
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        134..149
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        156..171
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   333 AA;  39264 MW;  6DE522F31AF39788 CRC64;
     MSGFGDGYVG TAQDAVKIRR LEKQREAERR KIEELKNKSS DGQPGLLQFG SSTSEILETA
     FKKETVGLVT REQYVEKRVN IRTKIEEEEK EKLQKLQQEE EELQMQKRKK RRVRGDPRLS
     FCDEIENGSD EDEFENQEPQ KKHGPVKLGK DPTVETSFLP DREREAEEQA ERERLKKQWS
     REQELIKNEP LTITYSYWDG TGHRRVIQVR KGDSIGEFLR AVQQQLAPEF REVRTTSVEN
     LLYVKEDLII PHQHSFYELI INKARGKSGP LFHFDVHEDV RTIADATKEK DESHAGKVVE
     RHWYEKNKHI FPASRWEIYD PTKKWERYTI HGD
 
 
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