XCT_ORYSI
ID XCT_ORYSI Reviewed; 333 AA.
AC B8BDW1;
DT 03-NOV-2009, integrated into UniProtKB/Swiss-Prot.
DT 03-MAR-2009, sequence version 1.
DT 03-AUG-2022, entry version 59.
DE RecName: Full=Protein XAP5 CIRCADIAN TIMEKEEPER;
GN Name=XCT; ORFNames=OsI_32174;
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- FUNCTION: Involved in light regulation of the circadian clock and
CC photomorphogenesis. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the FAM50 family. {ECO:0000305}.
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DR EMBL; CM000134; EEC84953.1; -; Genomic_DNA.
DR AlphaFoldDB; B8BDW1; -.
DR STRING; 39946.B8BDW1; -.
DR iPTMnet; B8BDW1; -.
DR EnsemblPlants; BGIOSGA031154-TA; BGIOSGA031154-PA; BGIOSGA031154.
DR Gramene; BGIOSGA031154-TA; BGIOSGA031154-PA; BGIOSGA031154.
DR HOGENOM; CLU_037985_1_1_1; -.
DR OMA; DFIWVFL; -.
DR Proteomes; UP000007015; Chromosome 9.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0009873; P:ethylene-activated signaling pathway; IEA:EnsemblPlants.
DR GO; GO:0035196; P:miRNA processing; IEA:EnsemblPlants.
DR GO; GO:0042752; P:regulation of circadian rhythm; IEA:EnsemblPlants.
DR GO; GO:0010099; P:regulation of photomorphogenesis; IEA:EnsemblPlants.
DR GO; GO:0009637; P:response to blue light; IEA:EnsemblPlants.
DR GO; GO:0010114; P:response to red light; IEA:EnsemblPlants.
DR GO; GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.
DR InterPro; IPR007005; XAP5.
DR PANTHER; PTHR12722; PTHR12722; 2.
DR Pfam; PF04921; XAP5; 1.
PE 3: Inferred from homology;
KW Biological rhythms; Coiled coil; Nucleus; Reference proteome.
FT CHAIN 1..333
FT /note="Protein XAP5 CIRCADIAN TIMEKEEPER"
FT /id="PRO_0000388468"
FT REGION 89..171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 12..43
FT /evidence="ECO:0000255"
FT COILED 70..116
FT /evidence="ECO:0000255"
FT COMPBIAS 89..109
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 134..149
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 156..171
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 333 AA; 39264 MW; 6DE522F31AF39788 CRC64;
MSGFGDGYVG TAQDAVKIRR LEKQREAERR KIEELKNKSS DGQPGLLQFG SSTSEILETA
FKKETVGLVT REQYVEKRVN IRTKIEEEEK EKLQKLQQEE EELQMQKRKK RRVRGDPRLS
FCDEIENGSD EDEFENQEPQ KKHGPVKLGK DPTVETSFLP DREREAEEQA ERERLKKQWS
REQELIKNEP LTITYSYWDG TGHRRVIQVR KGDSIGEFLR AVQQQLAPEF REVRTTSVEN
LLYVKEDLII PHQHSFYELI INKARGKSGP LFHFDVHEDV RTIADATKEK DESHAGKVVE
RHWYEKNKHI FPASRWEIYD PTKKWERYTI HGD