XERC_PELPB
ID XERC_PELPB Reviewed; 336 AA.
AC B4SDZ2;
DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 23-SEP-2008, sequence version 1.
DT 03-AUG-2022, entry version 70.
DE RecName: Full=Tyrosine recombinase XerC {ECO:0000255|HAMAP-Rule:MF_01808};
GN Name=xerC {ECO:0000255|HAMAP-Rule:MF_01808}; OrderedLocusNames=Ppha_0688;
OS Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1).
OC Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae;
OC Chlorobium/Pelodictyon group; Pelodictyon.
OX NCBI_TaxID=324925;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 5477 / BU-1;
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Mikhailova N., Liu Z., Li T., Zhao F., Overmann J.,
RA Bryant D.A., Richardson P.;
RT "Complete sequence of Pelodictyon phaeoclathratiforme BU-1.";
RL Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Site-specific tyrosine recombinase, which acts by catalyzing
CC the cutting and rejoining of the recombining DNA molecules. The XerC-
CC XerD complex is essential to convert dimers of the bacterial chromosome
CC into monomers to permit their segregation at cell division. It also
CC contributes to the segregational stability of plasmids.
CC {ECO:0000255|HAMAP-Rule:MF_01808}.
CC -!- SUBUNIT: Forms a cyclic heterotetrameric complex composed of two
CC molecules of XerC and two molecules of XerD. {ECO:0000255|HAMAP-
CC Rule:MF_01808}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01808}.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family. XerC subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_01808}.
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DR EMBL; CP001110; ACF42983.1; -; Genomic_DNA.
DR RefSeq; WP_012507478.1; NC_011060.1.
DR AlphaFoldDB; B4SDZ2; -.
DR SMR; B4SDZ2; -.
DR STRING; 324925.Ppha_0688; -.
DR PRIDE; B4SDZ2; -.
DR EnsemblBacteria; ACF42983; ACF42983; Ppha_0688.
DR KEGG; pph:Ppha_0688; -.
DR eggNOG; COG4974; Bacteria.
DR HOGENOM; CLU_027562_9_6_10; -.
DR OMA; HSFASHM; -.
DR OrthoDB; 745068at2; -.
DR Proteomes; UP000002724; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009037; F:tyrosine-based site-specific recombinase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0007059; P:chromosome segregation; IEA:UniProtKB-UniRule.
DR GO; GO:0006313; P:transposition, DNA-mediated; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; -; 1.
DR HAMAP; MF_01808; Recomb_XerC_XerD; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR004107; Integrase_SAM-like_N.
DR InterPro; IPR023009; Tyrosine_recombinase_XerC/XerD.
DR Pfam; PF02899; Phage_int_SAM_1; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; SSF56349; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW Cell cycle; Cell division; Chromosome partition; Cytoplasm;
KW DNA integration; DNA recombination; DNA-binding; Reference proteome.
FT CHAIN 1..336
FT /note="Tyrosine recombinase XerC"
FT /id="PRO_1000187606"
FT DOMAIN 14..106
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01248"
FT DOMAIN 127..330
FT /note="Tyr recombinase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 182
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01808"
FT ACT_SITE 206
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01808"
FT ACT_SITE 282
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01808"
FT ACT_SITE 285
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01808"
FT ACT_SITE 308
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01808"
FT ACT_SITE 317
FT /note="O-(3'-phospho-DNA)-tyrosine intermediate"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01808"
SQ SEQUENCE 336 AA; 38445 MW; C903F109DD97F529 CRC64;
MKDSSFTPSS TLFRGSTLPV ADFLEKLSTL KNLSPNTVIA YRTDLFQFFS FLAQHLGLAD
LSLFDPEQVT TVEVRLFMAA LIERGVRQRS IARKLASVKS FYRYLQESGH IRNSLFSALA
TPQYPKRVPG FLTEQQTEKF FNELLPQSAQ GFRKPEKNEL DESFICERDR SILELLYSSG
LRISELIGLK VGELDLERGY VKLTGKGRKQ RIVPVGQQAV DALKKYFEVR RNFFRMKRTG
DAGELLHVFV TKSGKKLYPM LVQRLTRKYL TSVTDQKKKN PHLLRHTFAT HLLNSGADLN
SVSDMLGHSN LSTTEIYTHV TFERLKEVYR KAHPNA