XERC_SYNAS
ID XERC_SYNAS Reviewed; 310 AA.
AC Q2LT92;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 21-FEB-2006, sequence version 1.
DT 25-MAY-2022, entry version 84.
DE RecName: Full=Tyrosine recombinase XerC {ECO:0000255|HAMAP-Rule:MF_01808};
GN Name=xerC {ECO:0000255|HAMAP-Rule:MF_01808}; OrderedLocusNames=SYNAS_14230;
GN ORFNames=SYN_02151;
OS Syntrophus aciditrophicus (strain SB).
OC Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophales; Syntrophaceae;
OC Syntrophus.
OX NCBI_TaxID=56780;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SB;
RX PubMed=17442750; DOI=10.1073/pnas.0610456104;
RA McInerney M.J., Rohlin L., Mouttaki H., Kim U., Krupp R.S.,
RA Rios-Hernandez L., Sieber J., Struchtemeyer C.G., Bhattacharyya A.,
RA Campbell J.W., Gunsalus R.P.;
RT "The genome of Syntrophus aciditrophicus: life at the thermodynamic limit
RT of microbial growth.";
RL Proc. Natl. Acad. Sci. U.S.A. 104:7600-7605(2007).
CC -!- FUNCTION: Site-specific tyrosine recombinase, which acts by catalyzing
CC the cutting and rejoining of the recombining DNA molecules. The XerC-
CC XerD complex is essential to convert dimers of the bacterial chromosome
CC into monomers to permit their segregation at cell division. It also
CC contributes to the segregational stability of plasmids.
CC {ECO:0000255|HAMAP-Rule:MF_01808}.
CC -!- SUBUNIT: Forms a cyclic heterotetrameric complex composed of two
CC molecules of XerC and two molecules of XerD. {ECO:0000255|HAMAP-
CC Rule:MF_01808}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01808}.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family. XerC subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_01808}.
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DR EMBL; CP000252; ABC77302.1; -; Genomic_DNA.
DR RefSeq; WP_011417324.1; NC_007759.1.
DR AlphaFoldDB; Q2LT92; -.
DR SMR; Q2LT92; -.
DR STRING; 56780.SYN_02151; -.
DR PRIDE; Q2LT92; -.
DR EnsemblBacteria; ABC77302; ABC77302; SYN_02151.
DR KEGG; sat:SYN_02151; -.
DR eggNOG; COG4974; Bacteria.
DR HOGENOM; CLU_027562_9_0_7; -.
DR OMA; HSFASHM; -.
DR OrthoDB; 745068at2; -.
DR Proteomes; UP000001933; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009037; F:tyrosine-based site-specific recombinase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0007059; P:chromosome segregation; IEA:UniProtKB-UniRule.
DR GO; GO:0006313; P:transposition, DNA-mediated; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; -; 1.
DR HAMAP; MF_01808; Recomb_XerC_XerD; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR004107; Integrase_SAM-like_N.
DR InterPro; IPR011931; Recomb_XerC.
DR InterPro; IPR023009; Tyrosine_recombinase_XerC/XerD.
DR Pfam; PF02899; Phage_int_SAM_1; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; SSF56349; 1.
DR TIGRFAMs; TIGR02224; recomb_XerC; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW Cell cycle; Cell division; Chromosome partition; Cytoplasm;
KW DNA integration; DNA recombination; DNA-binding; Reference proteome.
FT CHAIN 1..310
FT /note="Tyrosine recombinase XerC"
FT /id="PRO_1000215960"
FT DOMAIN 1..92
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01248"
FT DOMAIN 113..300
FT /note="Tyr recombinase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 153
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01808"
FT ACT_SITE 177
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01808"
FT ACT_SITE 252
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01808"
FT ACT_SITE 255
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01808"
FT ACT_SITE 278
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01808"
FT ACT_SITE 287
FT /note="O-(3'-phospho-DNA)-tyrosine intermediate"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01808"
SQ SEQUENCE 310 AA; 35544 MW; B471A776943F178D CRC64;
MDELIKEFDR YMDLERNLST HTRKNYLSDL NQFKIYLEEN HRVPTELKTE AWQNVDYMMV
RAFLGALYRR RVKKVTIARK LASLRAFFKY LHQKRKIQCN PLEAVSTPRT EKYIPAVLSV
DEIFVLLNLP FPEDVFGLRD RAILELFYSS GIRVSELTGI NEEDMDFSQG LIRIRGKGKK
ERIVPIGQPA SEAVQRYMMK KPGSETSGKA VATCPVPLFV NRRQGRLSAR SVARILSKYV
SMSGLQKQIS PHTLRHSFAT HLMDAGADLR SIQELLGHES LSTTQKYTAV SVNRLMAVYD
RAHPKARGGH