XERC_VIBCH
ID XERC_VIBCH Reviewed; 311 AA.
AC Q9KVL4;
DT 22-AUG-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Tyrosine recombinase XerC;
GN Name=xerC; OrderedLocusNames=VC_0128;
OS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=243277;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 39315 / El Tor Inaba N16961;
RX PubMed=10952301; DOI=10.1038/35020000;
RA Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L.,
RA Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R.,
RA Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D.,
RA Vamathevan J.J., Bass S., Qin H., Dragoi I., Sellers P., McDonald L.A.,
RA Utterback T.R., Fleischmann R.D., Nierman W.C., White O., Salzberg S.L.,
RA Smith H.O., Colwell R.R., Mekalanos J.J., Venter J.C., Fraser C.M.;
RT "DNA sequence of both chromosomes of the cholera pathogen Vibrio
RT cholerae.";
RL Nature 406:477-483(2000).
RN [2]
RP BACTERIOPHAGE INFECTION.
RX PubMed=12050668; DOI=10.1038/nature00782;
RA Huber K.E., Waldor M.K.;
RT "Filamentous phage integration requires the host recombinases XerC and
RT XerD.";
RL Nature 417:656-659(2002).
CC -!- FUNCTION: Site-specific tyrosine recombinase, which acts by catalyzing
CC the cutting and rejoining of the recombining DNA molecules. The XerC-
CC XerD complex is essential to convert dimers of the bacterial chromosome
CC into monomers to permit their segregation at cell division. It also
CC contributes to the segregational stability of plasmids (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Forms a cyclic heterotetrameric complex composed of two
CC molecules of XerC and two molecules of XerD. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- MISCELLANEOUS: During infection by the bacteriophage CTX-phi, it is
CC required by the bacteriophage, which uses host XerC and XerD proteins
CC to integrate the bacterial genome.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family. XerC subfamily.
CC {ECO:0000305}.
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DR EMBL; AE003852; AAF93305.1; -; Genomic_DNA.
DR PIR; A82361; A82361.
DR RefSeq; NP_229786.1; NC_002505.1.
DR RefSeq; WP_000786732.1; NZ_LT906614.1.
DR AlphaFoldDB; Q9KVL4; -.
DR SMR; Q9KVL4; -.
DR STRING; 243277.VC_0128; -.
DR DNASU; 2614552; -.
DR EnsemblBacteria; AAF93305; AAF93305; VC_0128.
DR GeneID; 57741375; -.
DR KEGG; vch:VC_0128; -.
DR PATRIC; fig|243277.26.peg.119; -.
DR eggNOG; COG4973; Bacteria.
DR HOGENOM; CLU_027562_9_0_6; -.
DR OMA; HSFASHM; -.
DR BioCyc; VCHO:VC0128-MON; -.
DR Proteomes; UP000000584; Chromosome 1.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009037; F:tyrosine-based site-specific recombinase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0007059; P:chromosome segregation; IEA:UniProtKB-UniRule.
DR GO; GO:0006313; P:transposition, DNA-mediated; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 1.10.443.10; -; 1.
DR HAMAP; MF_01808; Recomb_XerC_XerD; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR004107; Integrase_SAM-like_N.
DR InterPro; IPR011931; Recomb_XerC.
DR InterPro; IPR023009; Tyrosine_recombinase_XerC/XerD.
DR Pfam; PF02899; Phage_int_SAM_1; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; SSF56349; 1.
DR TIGRFAMs; TIGR02224; recomb_XerC; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW Cell cycle; Cell division; Chromosome partition; Cytoplasm;
KW DNA integration; DNA recombination; DNA-binding; Reference proteome.
FT CHAIN 1..311
FT /note="Tyrosine recombinase XerC"
FT /id="PRO_0000095344"
FT DOMAIN 11..97
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01248"
FT DOMAIN 118..298
FT /note="Tyr recombinase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 157
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 181
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 250
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 253
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 276
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
FT ACT_SITE 285
FT /note="O-(3'-phospho-DNA)-tyrosine intermediate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01246"
SQ SEQUENCE 311 AA; 35550 MW; 51AA0C689F8B9910 CRC64;
MKNDERTPLP DALAQPLERF YAYLHTEKGL SLYTQRNYKQ QLETMTQYLV QVGLTHWTQL
DSAWVRQLVM QGKRQGMKAS SIATRLSSLR SFLDFLILRG ELQANPAKGV SAPRKQRTLP
KNLDVDEMAQ LLEVTDDDPL SIRDRAIMEL MYGAGLRLAE LVSIDIKDVN LSEGEIRVIG
KGNKERKVWF AGQAQEWVGK WLKLRSQLAD SAETALFVSK LGTRISHRSV QKRMAEWGQK
QAVASHISPH KLRHSFATHM LESSNNLRAV QELLGHENIA TTQIYTHLDF QHLAQVYDQA
HPRARKKNKD D