XERO2_ARATH
ID XERO2_ARATH Reviewed; 193 AA.
AC P42758; Q41966;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 1.
DT 25-MAY-2022, entry version 125.
DE RecName: Full=Dehydrin Xero 2;
DE AltName: Full=Low-temperature-induced protein LTI30;
GN Name=XERO2; Synonyms=LTI30; OrderedLocusNames=At3g50970;
GN ORFNames=F24M12.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND TISSUE SPECIFICITY.
RC STRAIN=cv. Landsberg erecta;
RX PubMed=8601466; DOI=10.1016/0014-5793(96)00051-8;
RA Rouse D.T., Marotta R., Parish R.W.;
RT "Promoter and expression studies on an Arabidopsis thaliana dehydrin
RT gene.";
RL FEBS Lett. 381:252-256(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] OF 7-193.
RC STRAIN=cv. Landsberg erecta; TISSUE=Leaf;
RX PubMed=7948863; DOI=10.1007/bf00039526;
RA Welin B.V., Olson A., Nylander M., Palva E.T.;
RT "Characterization and differential expression of dhn/lea/rab-like genes
RT during cold acclimation and drought stress in Arabidopsis thaliana.";
RL Plant Mol. Biol. 26:131-144(1994).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 72-193.
RC STRAIN=cv. Columbia; TISSUE=Seedling;
RX PubMed=8281187; DOI=10.1046/j.1365-313x.1993.04061051.x;
RA Hoefte H., Desprez T., Amselem J., Chiapello H., Rouze P., Caboche M.,
RA Moisan A., Jourjon M.-F., Charpenteau J.-L., Berthomieu P., Guerrier D.,
RA Giraudat J., Quigley F., Thomas F., Yu D.-Y., Mache R., Raynal M.,
RA Cooke R., Grellet F., Delseny M., Parmentier Y., de Marcillac G., Gigot C.,
RA Fleck J., Philipps G., Axelos M., Bardet C., Tremousaygue D., Lescure B.;
RT "An inventory of 1152 expressed sequence tags obtained by partial
RT sequencing of cDNAs from Arabidopsis thaliana.";
RL Plant J. 4:1051-1061(1993).
CC -!- TISSUE SPECIFICITY: Expressed in desiccated pollen grains or seeds,
CC roots, stems, trichomes and the vascular tissues of leaves, and in all
CC tissues of young seedlings. {ECO:0000269|PubMed:8601466}.
CC -!- INDUCTION: By low temperature and also less strongly, by water stress
CC or abscisic acid (ABA).
CC -!- SIMILARITY: Belongs to the plant dehydrin family. {ECO:0000305}.
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DR EMBL; U19536; AAB00374.1; -; Genomic_DNA.
DR EMBL; AL132980; CAB62619.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78733.1; -; Genomic_DNA.
DR EMBL; AY054260; AAL06919.1; -; mRNA.
DR EMBL; AY132003; AAM91036.1; -; mRNA.
DR EMBL; X77613; CAA54704.1; -; mRNA.
DR EMBL; Z18121; CAA79106.2; -; mRNA.
DR PIR; S52654; S52654.
DR PIR; S63689; S63689.
DR RefSeq; NP_190666.1; NM_114957.3.
DR AlphaFoldDB; P42758; -.
DR BioGRID; 9579; 1.
DR STRING; 3702.AT3G50970.1; -.
DR PaxDb; P42758; -.
DR PRIDE; P42758; -.
DR ProteomicsDB; 242377; -.
DR DNASU; 824261; -.
DR EnsemblPlants; AT3G50970.1; AT3G50970.1; AT3G50970.
DR GeneID; 824261; -.
DR Gramene; AT3G50970.1; AT3G50970.1; AT3G50970.
DR KEGG; ath:AT3G50970; -.
DR Araport; AT3G50970; -.
DR TAIR; locus:2080918; AT3G50970.
DR eggNOG; ENOG502SU3T; Eukaryota.
DR HOGENOM; CLU_1410600_0_0_1; -.
DR InParanoid; P42758; -.
DR OMA; MTEKVME; -.
DR OrthoDB; 1576901at2759; -.
DR PhylomeDB; P42758; -.
DR PRO; PR:P42758; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; P42758; baseline and differential.
DR Genevisible; P42758; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0016020; C:membrane; IDA:TAIR.
DR GO; GO:0050897; F:cobalt ion binding; IDA:CAFA.
DR GO; GO:0005507; F:copper ion binding; IDA:CAFA.
DR GO; GO:0016151; F:nickel cation binding; IDA:CAFA.
DR GO; GO:0008270; F:zinc ion binding; IDA:CAFA.
DR GO; GO:0009631; P:cold acclimation; IGI:TAIR.
DR GO; GO:0050832; P:defense response to fungus; IEP:TAIR.
DR GO; GO:0009737; P:response to abscisic acid; IEP:TAIR.
DR GO; GO:0009409; P:response to cold; IEP:TAIR.
DR GO; GO:0009414; P:response to water deprivation; IEP:TAIR.
DR DisProt; DP00658; -.
DR InterPro; IPR000167; Dehydrin.
DR InterPro; IPR030513; Dehydrin_CS.
DR PANTHER; PTHR33346; PTHR33346; 4.
DR Pfam; PF00257; Dehydrin; 3.
DR PROSITE; PS00823; DEHYDRIN_2; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..193
FT /note="Dehydrin Xero 2"
FT /id="PRO_0000100039"
FT REGION 78..100
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 153..193
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 81..100
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 157..175
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 176..193
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 7..13
FT /note="QTGVQKK -> SPESKAQ (in Ref. 5; CAA54704)"
FT /evidence="ECO:0000305"
FT CONFLICT 150..151
FT /note="EQ -> DE (in Ref. 5; CAA54704)"
FT /evidence="ECO:0000305"
FT CONFLICT 187..190
FT /note="KLPG -> EAFPV (in Ref. 6; CAA79106)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 193 AA; 20909 MW; 9BF619555A661C1A CRC64;
MNSHQNQTGV QKKGITEKIM EKLPGHHGPT NTGVVHHEKK GMTEKVMEQL PGHHGATGTG
GVHHEKKGMT EKVMEQLPGH HGSHQTGTNT TYGTTNTGGV HHEKKSVTEK VMEKLPGHHG
SHQTGTNTAY GTNTNVVHHE KKGIAEKIKE QLPGHHGTHK TGTTTSYGNT GVVHHENKST
MDKIKEKLPG GHH
