XIP1_ORYSJ
ID XIP1_ORYSJ Reviewed; 304 AA.
AC Q7GCM7; A0A0P0Y5K7; A0A218MG79; O49828; Q2QZ60;
DT 16-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Xylanase inhibitor protein 1 {ECO:0000303|PubMed:15794761};
DE Short=XIP-I {ECO:0000303|PubMed:15794761};
DE AltName: Full=Class III chitinase homolog a {ECO:0000305};
DE AltName: Full=RIXI protein {ECO:0000303|PubMed:15794761};
DE Flags: Precursor;
GN Name=RIXI {ECO:0000303|PubMed:15794761}; Synonyms=Chib3H-a {ECO:0000305};
GN OrderedLocusNames=Os11g0701800 {ECO:0000312|EMBL:BAT15373.1},
GN LOC_Os11g47580 {ECO:0000312|EMBL:ABA95481.1};
GN ORFNames=OsJ_34838 {ECO:0000312|EMBL:EAZ19295.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Nipponbare; TISSUE=Callus;
RX PubMed=9501993; DOI=10.1093/dnares/4.6.379;
RA Nagasaki H., Yamamoto K., Shomura A., Koga-Ban Y., Takasuga A., Yano M.,
RA Minobe Y., Sasaki T.;
RT "Rice class III chitinase homologues isolated by random cloning of rice
RT cDNAs.";
RL DNA Res. 4:379-385(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Huo W.;
RT "Recombinant RIXI xylanase inhibitor and its inhibitorial activity to
RT family 11 xylanases.";
RL Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [6]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [8]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [9]
RP FUNCTION, AND INTERACTION WITH FUNGAL XYLANASES.
RX PubMed=15794761; DOI=10.1111/j.1742-4658.2005.04606.x;
RA Durand A., Hughes R.K., Roussel A., Flatman R., Henrissat B., Juge N.;
RT "Emergence of a subfamily of xylanase inhibitors within glycoside hydrolase
RT family 18.";
RL FEBS J. 272:1745-1755(2005).
RN [10]
RP TISSUE SPECIFICITY.
RX PubMed=17379695; DOI=10.1093/pcp/pcm038;
RA Tokunaga T., Esaka M.;
RT "Induction of a novel XIP-type xylanase inhibitor by external ascorbic acid
RT treatment and differential expression of XIP-family genes in rice.";
RL Plant Cell Physiol. 48:700-714(2007).
CC -!- FUNCTION: Fungal xylanase inhibitor. Possesses competitive inhibiting
CC activity against fungal endo-1,4-beta-D-xylanases belonging to
CC glycoside hydrolase family 11 (GH11). May function in plant defense
CC against secreted fungal pathogen xylanases. Is similar to class III
CC chitinases, but does not exhibit chitinase activity.
CC {ECO:0000269|PubMed:15794761}.
CC -!- SUBUNIT: Binds to fungal GH11 xylanases.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Constitutively expressed in shoots.
CC {ECO:0000269|PubMed:17379695}.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 18 family. Xylanase
CC inhibitor subfamily. {ECO:0000305}.
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DR EMBL; D55712; BAA23810.1; -; mRNA.
DR EMBL; AB027415; BAA77768.1; -; mRNA.
DR EMBL; AB027416; BAA77769.1; -; mRNA.
DR EMBL; AB027417; BAA77770.1; -; mRNA.
DR EMBL; AB027418; BAA77771.1; -; mRNA.
DR EMBL; AB027419; BAA77772.1; -; mRNA.
DR EMBL; AB027420; BAA77773.1; -; mRNA.
DR EMBL; KY807992; ASD56699.1; -; mRNA.
DR EMBL; AC134045; AAX95335.1; -; Genomic_DNA.
DR EMBL; DP000010; ABA95481.1; -; Genomic_DNA.
DR EMBL; AP008217; BAF28890.1; -; Genomic_DNA.
DR EMBL; AP014967; BAT15373.1; -; Genomic_DNA.
DR EMBL; CM000148; EAZ19295.1; -; Genomic_DNA.
DR EMBL; AK063939; BAG88922.1; -; mRNA.
DR EMBL; AK102862; BAG95753.1; -; mRNA.
DR PIR; JC5845; JC5845.
DR RefSeq; XP_015615153.1; XM_015759667.1.
DR AlphaFoldDB; Q7GCM7; -.
DR SMR; Q7GCM7; -.
DR STRING; 4530.OS11T0701800-01; -.
DR CAZy; GH18; Glycoside Hydrolase Family 18.
DR PaxDb; Q7GCM7; -.
DR PRIDE; Q7GCM7; -.
DR EnsemblPlants; Os11t0701800-01; Os11t0701800-01; Os11g0701800.
DR GeneID; 4351194; -.
DR Gramene; Os11t0701800-01; Os11t0701800-01; Os11g0701800.
DR KEGG; osa:4351194; -.
DR eggNOG; KOG4701; Eukaryota.
DR HOGENOM; CLU_007818_0_0_1; -.
DR InParanoid; Q7GCM7; -.
DR OMA; NKWTAKY; -.
DR OrthoDB; 923272at2759; -.
DR Proteomes; UP000000763; Chromosome 11.
DR Proteomes; UP000007752; Chromosome 11.
DR Proteomes; UP000059680; Chromosome 11.
DR ExpressionAtlas; Q7GCM7; baseline and differential.
DR Genevisible; Q7GCM7; OS.
DR GO; GO:0005576; C:extracellular region; IBA:GO_Central.
DR GO; GO:0004568; F:chitinase activity; IBA:GO_Central.
DR GO; GO:0004857; F:enzyme inhibitor activity; IDA:UniProtKB.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR GO; GO:0050832; P:defense response to fungus; IDA:UniProtKB.
DR CDD; cd02877; GH18_hevamine_XipI_class_III; 1.
DR InterPro; IPR045321; Cts1-like.
DR InterPro; IPR001223; Glyco_hydro18_cat.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR Pfam; PF00704; Glyco_hydro_18; 1.
DR SUPFAM; SSF51445; SSF51445; 1.
DR PROSITE; PS51910; GH18_2; 1.
PE 1: Evidence at protein level;
KW Disulfide bond; Plant defense; Reference proteome; Secreted; Signal.
FT SIGNAL 1..29
FT /evidence="ECO:0000255"
FT CHAIN 30..304
FT /note="Xylanase inhibitor protein 1"
FT /id="PRO_0000011991"
FT DOMAIN 34..304
FT /note="GH18"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01258"
FT DISULFID 53..93
FT /evidence="ECO:0000250|UniProtKB:Q8L5C6"
FT DISULFID 190..219
FT /evidence="ECO:0000250|UniProtKB:Q8L5C6"
SQ SEQUENCE 304 AA; 33947 MW; D6467FC22713DAFB CRC64;
MVALGRRSWL VPLAMVLAVS SCLAGPAMAA GKTGQMTVFW GRNKNEGTLK ETCDTGLYTT
VVISFYSVFG HGRYWGDLSG HDLRVIGADI KHCQSKNIFV FLSIGGAGKD YSLPTSKSAA
DVADNIWNAH MDGRRPGVFR PFGDAAVDGI DFFIDQGAPD HYDDLARNLY AYNKMYRART
PVRLTATVRC AFPDPRMKKA LDTKLFERIH VRFYDDATCS YNHAGLAGVM AQWNKWTARY
PGSHVYLGLA AANVPGKNDN VFIKQLYYDL LPNVQKAKNY GGIMLWDRFY DKQTGYGKTV
KYWA
