XKDA_BACSU
ID XKDA_BACSU Reviewed; 198 AA.
AC P39780; O34786;
DT 01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
DT 28-JUL-2009, sequence version 4.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Phage-like element PBSX protein XkdA;
GN Name=xkdA; Synonyms=ykxA; OrderedLocusNames=BSU12500;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168;
RA da Silva E., Karamata D.;
RT "Sequencing and characterisation of the region comprising XlyB, the second
RT lytic enzyme of the defective prophage PBSX of Bacillus subtilis.";
RL Submitted (NOV-1997) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
RN [3]
RP SEQUENCE REVISION TO 153.
RX PubMed=19383706; DOI=10.1099/mic.0.027839-0;
RA Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G., Sekowska A.,
RA Vallenet D., Wang T., Moszer I., Medigue C., Danchin A.;
RT "From a consortium sequence to a unified sequence: the Bacillus subtilis
RT 168 reference genome a decade later.";
RL Microbiology 155:1758-1775(2009).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-99.
RC STRAIN=168;
RA Krogh S., O'Reilly M., Nolan N., Devine K.M.;
RL Submitted (MAR-1996) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-100.
RC STRAIN=168 / SO113;
RX PubMed=8083174; DOI=10.1128/jb.176.18.5820-5830.1994;
RA McDonnell G.E., Wood H., Devine K.M., McConnell D.J.;
RT "Genetic control of bacterial suicide: regulation of the induction of PBSX
RT in Bacillus subtilis.";
RL J. Bacteriol. 176:5820-5830(1994).
RN [6]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-100.
RX PubMed=2125016; DOI=10.1016/0378-1119(90)90344-q;
RA Wood H.E., Devine K.M., McConnell D.J.;
RT "Characterisation of a repressor gene (xre) and a temperature-sensitive
RT allele from the Bacillus subtilis prophage, PBSX.";
RL Gene 96:83-88(1990).
CC -!- SIMILARITY: To B.subtilis YqaB. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAB87518.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=CAA84041.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AF034138; AAB87518.1; ALT_INIT; Genomic_DNA.
DR EMBL; AL009126; CAB13107.3; -; Genomic_DNA.
DR EMBL; Z70177; CAA94051.1; -; Genomic_DNA.
DR EMBL; Z34287; CAA84041.1; ALT_INIT; Genomic_DNA.
DR EMBL; M36478; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PIR; A69731; A69731.
DR PIR; PQ0134; PQ0134.
DR RefSeq; NP_389132.3; NC_000964.3.
DR RefSeq; WP_003232721.1; NZ_JNCM01000035.1.
DR AlphaFoldDB; P39780; -.
DR SMR; P39780; -.
DR STRING; 224308.BSU12500; -.
DR PaxDb; P39780; -.
DR PRIDE; P39780; -.
DR EnsemblBacteria; CAB13107; CAB13107; BSU_12500.
DR GeneID; 939838; -.
DR KEGG; bsu:BSU12500; -.
DR PATRIC; fig|224308.179.peg.1351; -.
DR eggNOG; COG2856; Bacteria.
DR OMA; LCHVLKH; -.
DR PhylomeDB; P39780; -.
DR BioCyc; BSUB:BSU12500-MON; -.
DR Proteomes; UP000001570; Chromosome.
DR InterPro; IPR010359; IrrE_HExxH.
DR Pfam; PF06114; Peptidase_M78; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..198
FT /note="Phage-like element PBSX protein XkdA"
FT /id="PRO_0000066015"
FT CONFLICT 63
FT /note="K -> R (in Ref. 4; CAA94051)"
FT /evidence="ECO:0000305"
FT CONFLICT 99
FT /note="E -> A (in Ref. 4; CAA94051)"
FT /evidence="ECO:0000305"
FT CONFLICT 153
FT /note="R -> C (in Ref. 1; AAB87518)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 198 AA; 23584 MW; E0ED19A4DABD4352 CRC64;
MGDYLSHLEE YVKNLYGRLG ITSPHHIDML KIAKDLDIWV HFEDMGSMMV KYDGMYSIVL
NQKKSREEQW EDFGHELCHV LKHAGNHFQM NKLFRELQEF QANQFMYHFC VPTFMLLQME
LPQWRSQALA TIAAVFRVTK EFADKRLDMF ERRKAGIQFQ KRLAYLLSHK RPNAYEEGDQ
QHLQVAEEKA LYHIGKNI
