XKDG_BACSU
ID XKDG_BACSU Reviewed; 311 AA.
AC P54327;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=Putative prophage capsid protein XkdG {ECO:0000305};
DE AltName: Full=Phage-like element PBSX protein XkdG;
DE Flags: Precursor;
GN Name=xkdG; OrderedLocusNames=BSU12610;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168;
RA Krogh S., O'Reilly M., Nolan N., Devine K.M.;
RL Submitted (MAR-1996) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
RN [3]
RP PROTEIN SEQUENCE OF 10-19, AND SUBCELLULAR LOCATION.
RC STRAIN=168;
RX PubMed=10658653; DOI=10.1099/00221287-146-1-65;
RA Hirose I., Sano K., Shioda I., Kumano M., Nakamura K., Yamane K.;
RT "Proteome analysis of Bacillus subtilis extracellular proteins: a two-
RT dimensional protein electrophoretic study.";
RL Microbiology 146:65-75(2000).
RN [4]
RP PUTATIVE FUNCTION, AND CLASSIFICATION.
RX PubMed=34362927; DOI=10.1038/s41467-021-25071-y;
RA Andreas M.P., Giessen T.W.;
RT "Large-scale computational discovery and analysis of virus-derived
RT microbial nanocompartments.";
RL Nat. Commun. 12:4748-4748(2021).
CC -!- FUNCTION: Possibly a prophage capsid protein.
CC {ECO:0000305|PubMed:34362927}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:10658653}.
CC -!- SIMILARITY: Belongs to the encapsulin family. Family 3 subfamily.
CC {ECO:0000305|PubMed:34362927}.
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DR EMBL; Z70177; CAA94062.1; -; Genomic_DNA.
DR EMBL; AL009126; CAB13118.1; -; Genomic_DNA.
DR PIR; G69731; G69731.
DR RefSeq; NP_389143.1; NC_000964.3.
DR RefSeq; WP_003232690.1; NZ_JNCM01000035.1.
DR AlphaFoldDB; P54327; -.
DR STRING; 224308.BSU12610; -.
DR PaxDb; P54327; -.
DR PRIDE; P54327; -.
DR EnsemblBacteria; CAB13118; CAB13118; BSU_12610.
DR GeneID; 939845; -.
DR KEGG; bsu:BSU12610; -.
DR PATRIC; fig|224308.179.peg.1365; -.
DR eggNOG; COG4653; Bacteria.
DR OMA; TSHTHDI; -.
DR BioCyc; BSUB:BSU12610-MON; -.
DR Proteomes; UP000001570; Chromosome.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR InterPro; IPR024455; Phage_capsid.
DR Pfam; PF05065; Phage_capsid; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; Reference proteome; Secreted; Signal.
FT SIGNAL 1..9
FT /evidence="ECO:0000305|PubMed:10658653"
FT CHAIN 10..311
FT /note="Putative prophage capsid protein XkdG"
FT /id="PRO_0000066021"
SQ SEQUENCE 311 AA; 34614 MW; 584AAF74400F4E59 CRC64;
MRNQEIIRKA EMSLSALKSG GLMNPAQASA FIRMVQNTPT IFSESRVIQM ENDSQKFEKI
GFGQRILRAA QEGKALSNDE LTVPTTSTVQ LNTKEVIAEI NITYDTLENN IEKDGLQQTI
MQILAERAAV DIEELIVNGD TASADPYLAQ LDGIRKQAVS HIVDMNGEEL SRATFKKGLK
AVPPKYLRIP QEFRFYTSHG LEVEWKDRVA DRQTNLGDQA VQGGLSTAFG VPVKGVSNIQ
PYTVGEGDAQ YDASDIILTH PKNIILGFSR NIRIEVDKDI RSRKFIIVLT AKLDSKFEEE
DACAKLINVK E